RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CHPF2Q9P2E5 772 aa4.68□□□□□ -1.66
LSM6-205ENST00000507449 LRRC10BA6NIK2 292 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 GOLGA8AA7E2F4 631 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 GOLGA8BA8MQT2 603 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 PRPF6O94906 941 aaKnown RBP4.67□□□□□ -1.66
LSM6-205ENST00000507449 ABLIM3O94929 683 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 CYP2C8P10632 490 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 PIN1Q13526 163 aaPredicted RBP4.67□□□□□ -1.66
LSM6-205ENST00000507449 TARBP2Q15633 366 aaKnown RBP4.67□□□□□ -1.66
LSM6-205ENST00000507449 FSCN1Q16658 493 aaKnown RBP4.67□□□□□ -1.66
LSM6-205ENST00000507449 CT83Q5H943 113 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 PITRM1Q5JRX3 1037 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 SLFN12LQ6IEE8 588 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 ZBTB46Q86UZ6 589 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 ZC3H18Q86VM9 953 aaKnown RBP4.67□□□□□ -1.66
LSM6-205ENST00000507449 FMNL3Q8IVF7 1028 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 SLC41A1Q8IVJ1 513 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 TMEFF1Q8IYR6 380 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 C7orf31Q8N865 590 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 FAXDC2Q96IV6 333 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 FAM84AQ96KN4 292 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 SLC13A1Q9BZW2 595 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 NGRNQ9NPE2 291 aaKnown RBP4.67□□□□□ -1.66
LSM6-205ENST00000507449 SPEF1Q9Y4P9 236 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 WASHC2AQ641Q2 1341 aa4.67□□□□□ -1.66
LSM6-205ENST00000507449 N4BP3O15049 544 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 SCGB1D2O95969 90 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 PFKMP08237 780 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 CELA3BP08861 270 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 ENPP1P22413 925 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 ECE1P42892 770 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 LIMS1P48059 325 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 IL13RA1P78552 427 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 SRSF2Q01130 221 aaKnown RBP4.66□□□□□ -1.66
LSM6-205ENST00000507449 TRIM25Q14258 630 aaKnown RBP4.66□□□□□ -1.66
LSM6-205ENST00000507449 NOLC1Q14978 699 aaKnown RBP eCLIP4.66□□□□□ -1.66
LSM6-205ENST00000507449 STILQ15468 1287 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 PRAMEF9Q5VWM5 478 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 KANK2Q63ZY3 851 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 KIAA1841Q6NSI8 718 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 PGM2L1Q6PCE3 622 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 ESPNLQ6ZVH7 1005 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 KCNK18Q7Z418 384 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 LINC00482Q8N8I6 264 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 EAF2Q96CJ1 260 aaPredicted RBP4.66□□□□□ -1.66
LSM6-205ENST00000507449 ZSWIM3Q96MP5 696 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 ACAP3Q96P50 834 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 RHOBTB2Q9BYZ6 727 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 CDH19Q9H159 772 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 EPB41L4AQ9HCS5 686 aaPredicted RBP4.66□□□□□ -1.66
LSM6-205ENST00000507449 DLL4Q9NR61 685 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 AASDHPPTQ9NRN7 309 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 GALNT8Q9NY28 637 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 FAM53CQ9NYF3 392 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 ZIM2Q9NZV7 527 aa4.66□□□□□ -1.66
LSM6-205ENST00000507449 TSPAN6O43657 245 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 SEMA7AO75326 666 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 PLA2G1BP04054 148 aaKnown RBP4.65□□□□□ -1.67
LSM6-205ENST00000507449 KRT1P04264 644 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 LPLP06858 475 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 COL6A1P12109 1028 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 RAP1GAPP47736 663 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 GLRBP48167 497 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 MTNR1BP49286 362 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 DLG4P78352 724 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 KRT85P78386 507 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 HTRA3P83110 453 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 FOXO4P98177 505 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 ROM1Q03395 351 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 ADCY2Q08462 1091 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 MESP2Q0VG99 397 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 CCDC62Q6P9F0 684 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 E2F7Q96AV8 911 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 TMEM209Q96SK2 561 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 TACO1Q9BSH4 297 aaKnown RBP4.65□□□□□ -1.67
LSM6-205ENST00000507449 C11orf84Q9BUA3 381 aaPredicted RBP4.65□□□□□ -1.67
LSM6-205ENST00000507449 BTBD2Q9BX70 525 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 QRSL1Q9H0R6 528 aaKnown RBP4.65□□□□□ -1.67
LSM6-205ENST00000507449 OR10A5Q9H207 317 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 ZNF277Q9NRM2 450 aaPredicted RBP4.65□□□□□ -1.67
LSM6-205ENST00000507449 KCND1Q9NSA2 647 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 ARHGAP20Q9P2F6 1191 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 ZFP69BQ9UJL9 534 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 EDARQ9UNE0 448 aa4.65□□□□□ -1.67
LSM6-205ENST00000507449 PRPF3O43395 683 aaKnown RBP4.64□□□□□ -1.67
LSM6-205ENST00000507449 ZRANB2O95218 330 aaKnown RBP eCLIP4.64□□□□□ -1.67
LSM6-205ENST00000507449 APOL3O95236 402 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 CFBP00751 764 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 PFKLP17858 780 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 AGXTP21549 392 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 DLX2Q07687 328 aaPredicted RBP4.64□□□□□ -1.67
LSM6-205ENST00000507449 PPP2R5AQ15172 486 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.64□□□□□ -1.67
LSM6-205ENST00000507449 TOR2AQ5JU69 321 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 TMEM132EQ6IEE7 984 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 TIGD7Q6NT04 549 aaPredicted RBP4.64□□□□□ -1.67
LSM6-205ENST00000507449 BCL6BQ8N143 479 aaPredicted RBP4.64□□□□□ -1.67
LSM6-205ENST00000507449 STPG3Q8N7X2 389 aa4.64□□□□□ -1.67
LSM6-205ENST00000507449 FBXO15Q8NCQ5 510 aaPredicted RBP4.64□□□□□ -1.67
LSM6-205ENST00000507449 TSPEARQ8WU66 669 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms