RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LMBR1Q8WVP7 490 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 REEP2Q9BRK0 252 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 DHX33Q9H6R0 707 aaKnown RBP15.77■□□□□ 0.12
RNF4-208ENST00000507247 POLD4Q9HCU8 107 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 SETD4Q9NVD3 440 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 HDAC6Q9UBN7 1215 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 RSPH10B2B2RC85 870 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 KLRC4O43908 158 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 DGAT1O75907 488 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 CABYRO75952 493 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 C22orf31O95567 290 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 TFRCP02786 760 aaKnown RBP15.76■□□□□ 0.11
RNF4-208ENST00000507247 RSPH10BP0C881 870 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 GUCY2CP25092 1073 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 HOXC8P31273 242 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 ASIC1P78348 528 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 ADAM17P78536 824 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 AMPD3Q01432 767 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 TBC1D8BQ0IIM8 1120 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 MAPK7Q13164 816 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 GIT2Q14161 759 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 EMC2Q15006 297 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 MARCH8Q5T0T0 291 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 CNNM4Q6P4Q7 775 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 MAEAQ7L5Y9 396 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 CCDC34Q96HJ3 373 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 LRRC27Q9C0I9 530 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 ATP6V0A4Q9HBG4 840 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 KCND2Q9NZV8 630 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 PPME1Q9Y570 386 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 PCDHA5Q9Y5H7 936 aa15.76■□□□□ 0.11
RNF4-208ENST00000507247 CENPFP49454 3210 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 NRCAMQ92823 1304 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 IGKV6-21A0A0C4DH24 114 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 RRN3P2A6NIE6 340 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 HIP1RO75146 1068 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 MAFO75444 373 aaPredicted RBP15.75■□□□□ 0.11
RNF4-208ENST00000507247 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
RNF4-208ENST00000507247 MYL1P05976 194 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 RFC5P40937 340 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 POLGP54098 1239 aaPredicted RBP15.75■□□□□ 0.11
RNF4-208ENST00000507247 ZNF200P98182 395 aaPredicted RBP15.75■□□□□ 0.11
RNF4-208ENST00000507247 MTHFD1LQ6UB35 978 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 RBM43Q6ZSC3 357 aaKnown RBP15.75■□□□□ 0.11
RNF4-208ENST00000507247 DAW1Q8N136 415 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 SYAP1Q96A49 352 aaPredicted RBP15.75■□□□□ 0.11
RNF4-208ENST00000507247 GLT1D1Q96MS3 346 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 GPRC5CQ9NQ84 441 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 GTF2IRD1Q9UHL9 959 aa15.75■□□□□ 0.11
RNF4-208ENST00000507247 HOOK1Q9UJC3 728 aaKnown RBP15.75■□□□□ 0.11
RNF4-208ENST00000507247 MBLAC1A4D2B0 266 aaPredicted RBP15.74■□□□□ 0.11
RNF4-208ENST00000507247 KLRC1P26715 233 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 SARSP49591 514 aaKnown RBP15.74■□□□□ 0.11
RNF4-208ENST00000507247 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
RNF4-208ENST00000507247 DRP2Q13474 957 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 ITGA7Q13683 1181 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 NFRKBQ6P4R8 1299 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 SESTD1Q86VW0 696 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 LRRC71Q8N4P6 559 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 LINC01465Q8N7H1 131 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 C7orf31Q8N865 590 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 SPATA20Q8TB22 786 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 DIS3LQ8TF46 1054 aaKnown RBP15.74■□□□□ 0.11
RNF4-208ENST00000507247 VTI1AQ96AJ9 217 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 TMEM106CQ9BVX2 250 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 STARD7Q9NQZ5 370 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 KIAA1468Q9P260 1216 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 TUBE1Q9UJT0 475 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 ODF2LQ9ULJ1 636 aa15.74■□□□□ 0.11
RNF4-208ENST00000507247 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
RNF4-208ENST00000507247 FRMD3A2A2Y4 597 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 C17orf102A2RUQ5 167 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 SFI1A8K8P3 1242 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 RPN1P04843 607 aaKnown RBP15.73■□□□□ 0.11
RNF4-208ENST00000507247 IDEP14735 1019 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 CLCN3P51790 818 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 COASYQ13057 564 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 KMT5BQ4FZB7 885 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 FAM47CQ5HY64 1035 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 NT5DC1Q5TFE4 455 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 GDF6Q6KF10 455 aaPredicted RBP15.73■□□□□ 0.11
RNF4-208ENST00000507247 EFCAB12Q6NXP0 572 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 UNC13DQ70J99 1090 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 MCPH1Q8NEM0 835 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 SLC7A3Q8WY07 619 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 SMARCE1Q969G3 411 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 TMEM143Q96AN5 459 aa15.73■□□□□ 0.11
RNF4-208ENST00000507247 POLR3FQ9H1D9 316 aaPredicted RBP15.73■□□□□ 0.11
RNF4-208ENST00000507247 PVALEFA0A1B0GWK0 134 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 MAGEB2O15479 319 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 TREHO43280 583 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 FAM13AO94988 1023 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 ZNF131P52739 623 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 EHHADHQ08426 723 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 RUFY4Q6ZNE9 571 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 SFR1Q86XK3 245 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 ANKLE1Q8NAG6 615 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 BSNDQ8WZ55 320 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms