RNA–Protein interactions for RNA: ENST00000507223.1

HMGCLL1-207, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 3

Gene HMGCLL1, Length 512 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-207ENST00000507223 DDX3XO00571 662 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 RASGRP1O95267 797 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 TSPY4P0CV99 314 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 TSPY10P0CW01 314 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 PYGMP11217 842 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 JAM2P57087 298 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 GUCY1A3Q02108 690 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 TM4SF20Q53R12 229 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 SPRED1Q7Z699 444 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 FGD2Q7Z6J4 655 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 ZFPM1Q8IX07 1006 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 ZSWIM2Q8NEG5 633 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 FBXW5Q969U6 566 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 SSBP3Q9BWW4 388 aaPredicted RBP5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 NCOA5Q9HCD5 579 aaKnown RBP5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 MED14O60244 1454 aa5.68□□□□□ -1.5
HMGCLL1-207ENST00000507223 PTPRTO14522 1441 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 KIF3BO15066 747 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 KLHL18O94889 574 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 IL18BPO95998 194 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 KNG1P01042 644 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 PDE6AP16499 860 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 IL13P35225 146 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 RGL3Q3MIN7 710 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 FIGNQ5HY92 759 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 ARHGAP36Q6ZRI8 547 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 OSTM1Q86WC4 334 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 NOSTRINQ8IVI9 506 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 CHST13Q8NET6 341 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 SH3RF3Q8TEJ3 882 aaPredicted RBP5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 DVL3Q92997 716 aaPredicted RBP5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 YIPF4Q9BSR8 244 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 PIF1Q9H611 641 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 DLL4Q9NR61 685 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 KCND1Q9NSA2 647 aa5.67□□□□□ -1.5
HMGCLL1-207ENST00000507223 NAIPQ13075 1403 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 CCDC163A0A0D9SF12 145 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 TCRBV16S1A1N1A0A5B0 115 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 CYR61O00622 381 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 B4GALT3O60512 393 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 EFCAB14O75071 495 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 C4BPAP04003 597 aaKnown RBP5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 ACVRL1P37023 503 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 OVCH1Q7RTY7 1134 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 BRAPQ7Z569 592 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 PTRH1Q86Y79 214 aaKnown RBP5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 CLIC6Q96NY7 704 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 CELF4Q9BZC1 486 aaKnown RBP5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 SLITRK6Q9H5Y7 841 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 BTBD7Q9P203 1132 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 NDOR1Q9UHB4 597 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 ST6GALNAC2Q9UJ37 374 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 UGGT1Q9NYU2 1555 aa5.66□□□□□ -1.5
HMGCLL1-207ENST00000507223 CCDC66A2RUB6 948 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 MROH6A6NGR9 719 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 MPIG6BO95866 241 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 CHGBP05060 677 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 PTPN1P18031 435 aaKnown RBP5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 NAT1P18440 290 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 MECP2P51608 486 aaKnown RBP5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 PFKPQ01813 784 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 DBPQ10586 325 aaPredicted RBP5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 BMS1Q14692 1282 aaKnown RBP5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 SKIDA1Q1XH10 827 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 PHF19Q5T6S3 580 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 MCTP2Q6DN12 878 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 GGT6Q6P531 493 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 UBXN4Q92575 508 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 DRC1Q96MC2 740 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 WRNIP1Q96S55 665 aa5.65□□□□□ -1.5
HMGCLL1-207ENST00000507223 TMEM131LA2VDJ0 1609 aa5.65□□□□□ -1.51
HMGCLL1-207ENST00000507223 TNRQ92752 1358 aa5.65□□□□□ -1.51
HMGCLL1-207ENST00000507223 ADGRB3O60242 1522 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 IQGAP1P46940 1657 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 PLD2O14939 933 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 CLASP2O75122 1294 aaKnown RBP5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 SRGAP2CP0DJJ0 459 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 HSPA2P54652 639 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 CCDC144BQ3MJ40 725 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 VASNQ6EMK4 673 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 CRIP3Q6Q6R5 217 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 DLG3Q92796 817 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 RRP7BPQ9NSQ0 103 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 TMEM260Q9NX78 707 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 INVSQ9Y283 1065 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 NUB1Q9Y5A7 615 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 SPHKAPQ2M3C7 1700 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 STRCP1A6NGW2 1772 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 MYO5BQ9ULV0 1848 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 IQSEC2Q5JU85 1478 aa5.64□□□□□ -1.51
HMGCLL1-207ENST00000507223 AOAHP28039 575 aa5.63□□□□□ -1.51
HMGCLL1-207ENST00000507223 NFE2L2Q16236 605 aa5.63□□□□□ -1.51
HMGCLL1-207ENST00000507223 CRB2Q5IJ48 1285 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms