RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 NME8Q8N427 588 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 SNX29Q8TEQ0 813 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 HERVK_113Q902F9 699 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 RNPC3Q96LT9 517 aaKnown RBP20.31■□□□□ 0.84
NPHP4-210ENST00000506941 PPP1R16BQ96T49 567 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 SUGCTQ9HAC7 445 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 CDHR5Q9HBB8 845 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 ANKEF1Q9NU02 776 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 CXXC1Q9P0U4 656 aaPredicted RBP20.31■□□□□ 0.84
NPHP4-210ENST00000506941 TRPV2Q9Y5S1 764 aa20.31■□□□□ 0.84
NPHP4-210ENST00000506941 LPIN1Q14693 890 aa20.3■□□□□ 0.84
NPHP4-210ENST00000506941 PLEKHG4Q58EX7 1191 aa20.3■□□□□ 0.84
NPHP4-210ENST00000506941 FBXO47Q5MNV8 452 aa20.3■□□□□ 0.84
NPHP4-210ENST00000506941 IER5Q5VY09 327 aa20.3■□□□□ 0.84
NPHP4-210ENST00000506941 CELF4Q9BZC1 486 aaKnown RBP20.3■□□□□ 0.84
NPHP4-210ENST00000506941 DHX33Q9H6R0 707 aaKnown RBP20.3■□□□□ 0.84
NPHP4-210ENST00000506941 BMP2KQ9NSY1 1161 aaPredicted RBP20.3■□□□□ 0.84
NPHP4-210ENST00000506941 CHD9Q3L8U1 2897 aa20.3■□□□□ 0.84
NPHP4-210ENST00000506941 KDM3AQ9Y4C1 1321 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 GPR32O75388 356 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 BRD1O95696 1058 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 GHRP10912 638 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 MARCKSP29966 332 aaPredicted RBP20.29■□□□□ 0.84
NPHP4-210ENST00000506941 NASPP49321 788 aaPredicted RBP20.29■□□□□ 0.84
NPHP4-210ENST00000506941 RARRES1P49788 294 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 KIZQ2M2Z5 673 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 FOXD4L6Q3SYB3 417 aaPredicted RBP20.29■□□□□ 0.84
NPHP4-210ENST00000506941 CNKSR3Q6P9H4 555 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 FOXD4L3Q6VB84 417 aaPredicted RBP20.29■□□□□ 0.84
NPHP4-210ENST00000506941 AKT3Q9Y243 479 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 PPME1Q9Y570 386 aa20.29■□□□□ 0.84
NPHP4-210ENST00000506941 M0QZ92 97 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 XRCC6P12956 609 aaKnown RBP eCLIP20.28■□□□□ 0.84
NPHP4-210ENST00000506941 MUTP22033 750 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 TMOD1P28289 359 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 RFC5P40937 340 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 POLGP54098 1239 aaPredicted RBP20.28■□□□□ 0.84
NPHP4-210ENST00000506941 EMC2Q15006 297 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 KRT79Q5XKE5 535 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 DBF4BQ8NFT6 615 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 NACC1Q96RE7 527 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 MAP7D2Q96T17 732 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 AGO3Q9H9G7 860 aaKnown RBP20.28■□□□□ 0.84
NPHP4-210ENST00000506941 XPNPEP1Q9NQW7 623 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 DDX19AQ9NUU7 478 aaKnown RBP20.28■□□□□ 0.84
NPHP4-210ENST00000506941 TFIP11Q9UBB9 837 aaKnown RBP20.28■□□□□ 0.84
NPHP4-210ENST00000506941 FBXO2Q9UK22 296 aaPredicted RBP20.28■□□□□ 0.84
NPHP4-210ENST00000506941 DBR1Q9UK59 544 aaKnown RBP20.28■□□□□ 0.84
NPHP4-210ENST00000506941 KIAA1024Q9UPX6 916 aa20.28■□□□□ 0.84
NPHP4-210ENST00000506941 SOX1O00570 391 aaPredicted RBP20.27■□□□□ 0.84
NPHP4-210ENST00000506941 NLRP11P59045 1033 aaKnown RBP20.27■□□□□ 0.84
NPHP4-210ENST00000506941 SLC39A14Q15043 492 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 LRIT3Q3SXY7 679 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 FAM109BQ6ICB4 259 aaPredicted RBP20.27■□□□□ 0.84
NPHP4-210ENST00000506941 TMEM40Q8WWA1 233 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 SLC7A3Q8WY07 619 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 ZNF668Q96K58 619 aaPredicted RBP20.27■□□□□ 0.84
NPHP4-210ENST00000506941 ADAMTS10Q9H324 1103 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 GINS2Q9Y248 185 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 STK24Q9Y6E0 443 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 MORC2Q9Y6X9 1032 aaPredicted RBP20.27■□□□□ 0.84
NPHP4-210ENST00000506941 TTC3P53804 2025 aa20.27■□□□□ 0.84
NPHP4-210ENST00000506941 ACTN1P12814 892 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 DDIT3P35638 169 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 GPC3P51654 580 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 GRB10Q13322 594 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 HYIQ5T013 277 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 TSHZ1Q6ZSZ6 1077 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 KCNK18Q7Z418 384 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 LINC00301Q8NCQ3 95 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 TMEM143Q96AN5 459 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 AK8Q96MA6 479 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 ZNF396Q96N95 335 aaPredicted RBP20.26■□□□□ 0.83
NPHP4-210ENST00000506941 CLIC6Q96NY7 704 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 PNMA5Q96PV4 448 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 OSMRQ99650 979 aa20.26■□□□□ 0.83
NPHP4-210ENST00000506941 JPH2Q9BR39 696 aaPredicted RBP20.26■□□□□ 0.83
NPHP4-210ENST00000506941 IFIH1Q9BYX4 1025 aaKnown RBP20.26■□□□□ 0.83
NPHP4-210ENST00000506941 SUCLA2Q9P2R7 463 aaPredicted RBP20.26■□□□□ 0.83
NPHP4-210ENST00000506941 DAXXQ9UER7 740 aaPredicted RBP20.26■□□□□ 0.83
NPHP4-210ENST00000506941 SRPRBQ9Y5M8 271 aaKnown RBP20.26■□□□□ 0.83
NPHP4-210ENST00000506941 ZBBXA8MT70 800 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 E9PMD0 336 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 BAIAP3O94812 1187 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 CD52P31358 61 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 LONP1P36776 959 aaKnown RBP20.25■□□□□ 0.83
NPHP4-210ENST00000506941 DNM2P50570 870 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 CABP7Q86V35 215 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 KSR1Q8IVT5 923 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 SEPT8Q92599 483 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 CCDC43Q96MW1 224 aaKnown RBP20.25■□□□□ 0.83
NPHP4-210ENST00000506941 MTRQ99707 1265 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 CSRNP2Q9H175 543 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 CHD7Q9P2D1 2997 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 NOC2LQ9Y3T9 749 aaKnown RBP20.25■□□□□ 0.83
NPHP4-210ENST00000506941 SQORQ9Y6N5 450 aa20.25■□□□□ 0.83
NPHP4-210ENST00000506941 USO1O60763 962 aaKnown RBP20.24■□□□□ 0.83
NPHP4-210ENST00000506941 DGAT1O75907 488 aa20.24■□□□□ 0.83
NPHP4-210ENST00000506941 CRYBB1P53674 252 aaPredicted RBP20.24■□□□□ 0.83
NPHP4-210ENST00000506941 WDR5P61964 334 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms