RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 ZSWIM2Q8NEG5 633 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.43□□□□□ -0.74
PHF3-208ENST00000506783 AMFRQ9UKV5 643 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 RAB21Q9UL25 225 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 PNMA2Q9UL42 364 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 LEMD3Q9Y2U8 911 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 ITIH6Q6UXX5 1313 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 KDM3BQ7LBC6 1761 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 CRKP46108 304 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 CYFIP1Q7L576 1253 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 PPM1EQ8WY54 764 aa10.43□□□□□ -0.74
PHF3-208ENST00000506783 DHX36Q9H2U1 1008 aaKnown RBP10.43□□□□□ -0.74
PHF3-208ENST00000506783 LOC102724159A0A0B4J2E5 919 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 GOLGA6L10A0A0M3HER8 536 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 GOLGA8SH3BPF8 625 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 GOLGA8MH3BSY2 632 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 PEX3P56589 373 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 PWP2Q15269 919 aaKnown RBP10.42□□□□□ -0.74
PHF3-208ENST00000506783 FAM47EQ6ZV65 393 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 NIM1KQ8IY84 436 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 SLC20A1Q8WUM9 679 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 ELAC2Q9BQ52 826 aaKnown RBP10.42□□□□□ -0.74
PHF3-208ENST00000506783 CEP83Q9Y592 693 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 SLC16A4O15374 487 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 PAPD7Q5XG87 772 aaKnown RBP10.42□□□□□ -0.74
PHF3-208ENST00000506783 C16orf86Q6ZW13 317 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 CDR2LQ86X02 465 aaPredicted RBP10.42□□□□□ -0.74
PHF3-208ENST00000506783 ATG4AQ8WYN0 398 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 AMNQ9BXJ7 453 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 AJAP1Q9UKB5 411 aaPredicted RBP10.42□□□□□ -0.74
PHF3-208ENST00000506783 GOLGA4Q13439 2230 aaKnown RBP10.42□□□□□ -0.74
PHF3-208ENST00000506783 GRID2IPA4D2P6 1211 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 PEX10O60683 326 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 NDUFB10O96000 172 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 MARCKSL1P49006 195 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 PLA2G4FQ68DD2 849 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 TADA2BQ86TJ2 420 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.42□□□□□ -0.74
PHF3-208ENST00000506783 ZNF577Q9BSK1 485 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 THAP2Q9H0W7 228 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 SIK3Q9Y2K2 1263 aa10.42□□□□□ -0.74
PHF3-208ENST00000506783 F5H423 210 aaPredicted RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 GJB6O95452 261 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 DPEP1P16444 411 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 DYNLT1P63172 113 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 SBK1Q52WX2 424 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 TBC1D1Q86TI0 1168 aaPredicted RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 ANKS1AQ92625 1134 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 EIF2AK1Q9BQI3 630 aaKnown RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 GLIS2Q9BZE0 524 aaPredicted RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 MYH15Q9Y2K3 1946 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 ZNF233A6NK53 670 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 PIK3R2O00459 728 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 RPL13P26373 211 aaKnown RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 LSP1P33241 339 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 RHBDL3P58872 404 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 DLGAP5Q15398 846 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 SLC18A3Q16572 532 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 KNOP1Q1ED39 458 aaKnown RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 TTC16Q8NEE8 873 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 SLC35G2Q8TBE7 412 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 DHX38Q92620 1227 aaKnown RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 NT5C3AQ9H0P0 336 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 LRRC4CQ9HCJ2 640 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 ALG13Q9NP73 1137 aaKnown RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 FTLP02792 175 aaPredicted RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 ATF7P17544 494 aaPredicted RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 TM4SF1P30408 202 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 PSMC4P43686 418 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 DLG4P78352 724 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 C18orf8Q96DM3 657 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 CCT8L2Q96SF2 557 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 LZTS2Q9BRK4 669 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 TOPORSQ9NS56 1045 aaPredicted RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
PHF3-208ENST00000506783 PPP1R9AQ9ULJ8 1098 aa10.41□□□□□ -0.74
PHF3-208ENST00000506783 LRRC37A3O60309 1634 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 PI4K2BG5E9Z4 385 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 PGRMC1O00264 195 aaKnown RBP10.4□□□□□ -0.74
PHF3-208ENST00000506783 FOXN3O00409 490 aaPredicted RBP10.4□□□□□ -0.74
PHF3-208ENST00000506783 CYP26A1O43174 497 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 CALUO43852 315 aaPredicted RBP10.4□□□□□ -0.74
PHF3-208ENST00000506783 BMP3P12645 472 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 LRRC63Q05C16 580 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 ASPRV1Q53RT3 343 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 KIF2BQ8N4N8 673 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 AGBL1Q96MI9 1066 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 ERGIC2Q96RQ1 377 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 SPZ1Q9BXG8 430 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 NEUROG2Q9H2A3 272 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 KCND1Q9NSA2 647 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 ANKFY1Q9P2R3 1169 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 UPP2O95045 317 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 KIF4AO95239 1232 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 TNNI1P19237 187 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 XKR9Q5GH70 373 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 HIBCHQ6NVY1 386 aaPredicted RBP10.4□□□□□ -0.74
PHF3-208ENST00000506783 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
PHF3-208ENST00000506783 HNRNPLLQ8WVV9 542 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms