RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 LRRN2O75325 713 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 GNA14O95837 355 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 GJA5P36382 358 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 PSMC5P62195 406 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 DNAAF5Q86Y56 855 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 BSNDQ8WZ55 320 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 GPRASP2Q96D09 838 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 BORCS6Q96GS4 357 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 TCEAL9Q9UHQ7 104 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 MYH10P35580 1976 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 A0A0G2JLL6 359 aaPredicted RBP13.39□□□□□ -0.27
LIN54-206ENST00000506560 CNMDO75829 334 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 STBD1O95210 358 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 PGK2P07205 417 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 HOXA7P31268 230 aaPredicted RBP13.39□□□□□ -0.27
LIN54-206ENST00000506560 IREB2P48200 963 aaKnown RBP13.39□□□□□ -0.27
LIN54-206ENST00000506560 PEX3P56589 373 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 CYFIP1Q7L576 1253 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 PRRT2Q7Z6L0 340 aaPredicted RBP13.39□□□□□ -0.27
LIN54-206ENST00000506560 C4orf19Q8IY42 314 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 SAMD3Q8N6K7 520 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 GANQ9H2C0 597 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 FHOD1Q9Y613 1164 aa13.39□□□□□ -0.27
LIN54-206ENST00000506560 ENC1O14682 589 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 KIF5CO60282 957 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 KRT76Q01546 638 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 GFPT1Q06210 699 aaPredicted RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 MOGSQ13724 837 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 FRMD5Q7Z6J6 570 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 KCTD17Q8N5Z5 321 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 CBWD1Q9BRT8 395 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 SPATC1LQ9H0A9 340 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 ZNHIT6Q9NWK9 470 aaKnown RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 DBR1Q9UK59 544 aaKnown RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 USP20Q9Y2K6 914 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 MCM3APO60318 1980 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 LYPLA2O95372 231 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 XRCC5P13010 732 aaKnown RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 HNRNPH3P31942 346 aaKnown RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 ACTR2P61160 394 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 MTERF4Q7Z6M4 381 aaKnown RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 CCDC42Q96M95 316 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 GBP3Q9H0R5 595 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 ZNF408Q9H9D4 720 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 JPH1Q9HDC5 661 aaPredicted RBP13.38□□□□□ -0.27
LIN54-206ENST00000506560 MRFAP1Q9Y605 127 aa13.38□□□□□ -0.27
LIN54-206ENST00000506560 AFPP02771 609 aaKnown RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 EPB41P11171 864 aaKnown RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 PON1P27169 355 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 JAK3P52333 1124 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 KIF11P52732 1056 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 DLG4P78352 724 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 IRX3P78415 501 aaPredicted RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 CBWD6Q4V339 395 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 CBWD3Q5JTY5 395 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 CBWD5Q5RIA9 395 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 CCDC122Q5T0U0 273 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 FAM186BQ8IYM0 893 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 SYCP3Q8IZU3 236 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 FAM133AQ8N9E0 248 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 ERO1AQ96HE7 468 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 KCND2Q9NZV8 630 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 HDAC6Q9UBN7 1215 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 SLC9A2Q9UBY0 812 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 LOXHD1Q8IVV2 1947 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 MYH9P35579 1960 aaKnown RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 SPATA31C2B4DYI2 1134 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 RAPGEF1Q13905 1077 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 TMEM63BQ5T3F8 832 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 KIAA1328Q86T90 577 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 ERO1BQ86YB8 467 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 SIX2Q9NPC8 291 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 CEP72Q9P209 647 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 PNMA2Q9UL42 364 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 PFASO15067 1338 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 SPDYE5A6NIY4 337 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 EIF3CLB5ME19 914 aaKnown RBP13.37□□□□□ -0.27
LIN54-206ENST00000506560 PLS3P13797 630 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 ATP4AP20648 1035 aa13.37□□□□□ -0.27
LIN54-206ENST00000506560 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms