RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SCLT1Q96NL6 688 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 POLR3CQ9BUI4 534 aaPredicted RBP18.65■□□□□ 0.58
SNCA-209ENST00000506244 FTHL17Q9BXU8 183 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 SUGCTQ9HAC7 445 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 FOXD4L1Q9NU39 408 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 WRAP73Q9P2S5 460 aaPredicted RBP18.65■□□□□ 0.58
SNCA-209ENST00000506244 GINS2Q9Y248 185 aa18.65■□□□□ 0.58
SNCA-209ENST00000506244 EVPLQ92817 2033 aa18.64■□□□□ 0.58
SNCA-209ENST00000506244 IGKV6-21A0A0C4DH24 114 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 TMEM150BA6NC51 233 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 VTNP04004 478 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 CRYBB1P53674 252 aaPredicted RBP18.64■□□□□ 0.57
SNCA-209ENST00000506244 ATP2C1P98194 919 aaPredicted RBP18.64■□□□□ 0.57
SNCA-209ENST00000506244 PDIA5Q14554 519 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 DTHD1Q6ZMT9 781 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 HERC6Q8IVU3 1022 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 C4orf32Q8N8J7 132 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 TIFAQ96CG3 184 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 PBX4Q9BYU1 374 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 ANKEF1Q9NU02 776 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 LRWD1Q9UFC0 647 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 ARID2Q68CP9 1835 aa18.64■□□□□ 0.57
SNCA-209ENST00000506244 STX6O43752 255 aa18.63■□□□□ 0.57
SNCA-209ENST00000506244 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNCA-209ENST00000506244 RPA1P27694 616 aa18.63■□□□□ 0.57
SNCA-209ENST00000506244 KIZQ2M2Z5 673 aa18.63■□□□□ 0.57
SNCA-209ENST00000506244 XKR9Q5GH70 373 aa18.63■□□□□ 0.57
SNCA-209ENST00000506244 ARL6IP4Q66PJ3 421 aaKnown RBP18.63■□□□□ 0.57
SNCA-209ENST00000506244 FERMT3Q86UX7 667 aa18.63■□□□□ 0.57
SNCA-209ENST00000506244 IGSF22Q8N9C0 903 aa18.63■□□□□ 0.57
SNCA-209ENST00000506244 CEP89Q96ST8 783 aa18.63■□□□□ 0.57
SNCA-209ENST00000506244 GRXCR1A8MXD5 290 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 GPR182O15218 404 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 GPR32O75388 356 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 RPS6KA5O75582 802 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 CD52P31358 61 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 NPEPPSP55786 919 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 NLRP11P59045 1033 aaKnown RBP18.62■□□□□ 0.57
SNCA-209ENST00000506244 DEFB103AP81534 67 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
SNCA-209ENST00000506244 EMC2Q15006 297 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 TCTN1Q2MV58 587 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 DEFB123Q8N688 67 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 TCP11Q8WWU5 503 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 NACC1Q96RE7 527 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 OSMRQ99650 979 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 SH2D3AQ9BRG2 576 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 ZBED2Q9BTP6 218 aa18.62■□□□□ 0.57
SNCA-209ENST00000506244 ZSCAN16Q9H4T2 348 aaPredicted RBP18.62■□□□□ 0.57
SNCA-209ENST00000506244 DHX33Q9H6R0 707 aaKnown RBP18.62■□□□□ 0.57
SNCA-209ENST00000506244 TLL1O43897 1013 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 DGAT1O75907 488 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 SPATA31C1P0DKV0 1188 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 CCT6AP40227 531 aaKnown RBP18.61■□□□□ 0.57
SNCA-209ENST00000506244 GPC3P51654 580 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 KRT79Q5XKE5 535 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 ZNF410Q86VK4 478 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 MYOCDQ8IZQ8 938 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 SNX29Q8TEQ0 813 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 NLRP7Q8WX94 980 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 PSPC1Q8WXF1 523 aaKnown RBP18.61■□□□□ 0.57
SNCA-209ENST00000506244 PPP1R16BQ96T49 567 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 MTRQ99707 1265 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 AGO3Q9H9G7 860 aaKnown RBP18.61■□□□□ 0.57
SNCA-209ENST00000506244 ATP6V0A4Q9HBG4 840 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 SUCLA2Q9P2R7 463 aaPredicted RBP18.61■□□□□ 0.57
SNCA-209ENST00000506244 PADI3Q9ULW8 664 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 MTMR6Q9Y217 621 aa18.61■□□□□ 0.57
SNCA-209ENST00000506244 GBF1Q92538 1859 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 MED24O75448 989 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 GJB5O95377 273 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 RARRES1P49788 294 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 RESTQ13127 1097 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 POTEGQ6S5H5 508 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 GCOM2Q9BZD3 368 aaPredicted RBP18.6■□□□□ 0.57
SNCA-209ENST00000506244 OSBPL7Q9BZF2 842 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 SLC28A3Q9HAS3 691 aa18.6■□□□□ 0.57
SNCA-209ENST00000506244 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
SNCA-209ENST00000506244 DBR1Q9UK59 544 aaKnown RBP18.6■□□□□ 0.57
SNCA-209ENST00000506244 PTPRSQ13332 1948 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 LOXHD1Q8IVV2 1947 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 EIF4BP23588 611 aaKnown RBP18.59■□□□□ 0.57
SNCA-209ENST00000506244 PBX2P40425 430 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 RABGGTBP53611 331 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 PPP2R2DQ66LE6 453 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 RHPN2Q8IUC4 686 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 PIGOQ8TEQ8 1089 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 TMEM40Q8WWA1 233 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 AK8Q96MA6 479 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 INO80BQ9C086 356 aaPredicted RBP18.59■□□□□ 0.57
SNCA-209ENST00000506244 ADAMTS10Q9H324 1103 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 ERVK-5Q9HDB9 667 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 NOC2LQ9Y3T9 749 aaKnown RBP18.59■□□□□ 0.57
SNCA-209ENST00000506244 COL4A3BPQ9Y5P4 624 aa18.59■□□□□ 0.57
SNCA-209ENST00000506244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.58■□□□□ 0.56
SNCA-209ENST00000506244 VWA3AA6NCI4 1184 aa18.58■□□□□ 0.56
SNCA-209ENST00000506244 ASAP2O43150 1006 aa18.58■□□□□ 0.56
SNCA-209ENST00000506244 DARSP14868 501 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms