RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 AZI2Q9H6S1 392 aa11.22□□□□□ -0.61
DDX41-203ENST00000504781 SAMSN1Q9NSI8 373 aaKnown RBP11.22□□□□□ -0.61
DDX41-203ENST00000504781 IMPACTQ9P2X3 320 aa11.22□□□□□ -0.61
DDX41-203ENST00000504781 LIMA1Q9UHB6 759 aaKnown RBP11.22□□□□□ -0.61
DDX41-203ENST00000504781 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
DDX41-203ENST00000504781 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
DDX41-203ENST00000504781 CTNND2Q9UQB3 1225 aa11.22□□□□□ -0.61
DDX41-203ENST00000504781 PLXNB2O15031 1838 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 NOP56O00567 594 aaKnown RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 PDXKO00764 312 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 GNRH1P01148 92 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 EEF1GP26641 437 aaKnown RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 CTGFP29279 349 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 TCF7P36402 384 aaPredicted RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 RGS2P41220 211 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 RTP1P59025 263 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 SNRPFP62306 86 aaKnown RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 FKBP3Q00688 224 aaKnown RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 NR1I3Q14994 352 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 UGCGQ16739 394 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 BMT2Q1RMZ1 405 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 TCP11X2Q5H9J9 407 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 FILIP1Q7Z7B0 1213 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 CSGALNACT2Q8N6G5 542 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 MCPH1Q8NEM0 835 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 KIFAP3Q92845 792 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 CEP170P1Q96L14 293 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 SPATA33Q96N06 139 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 KATNBL1Q9H079 304 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 ST6GALNAC4Q9H4F1 302 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 MRPL44Q9H9J2 332 aaKnown RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 CYP26B1Q9NR63 512 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 PDGFCQ9NRA1 345 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 IFNKQ9P0W0 207 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 MAGEC2Q9UBF1 373 aaPredicted RBP11.21□□□□□ -0.61
DDX41-203ENST00000504781 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 TRAF3IP3Q9Y228 551 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 Q9Y3F1 56 aa11.21□□□□□ -0.61
DDX41-203ENST00000504781 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 SFI1A8K8P3 1242 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 HIP1RO75146 1068 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 ARIH2O95376 493 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 SLC34A2O95436 690 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 GNA14O95837 355 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 IGHA2P01877 340 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 OATP04181 439 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 PLS3P13797 630 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 ATP4AP20648 1035 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 RFC5P40937 340 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 SMTNP53814 917 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 PRMT2P55345 433 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 FCGRTP55899 365 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 C1QBPQ07021 282 aaKnown RBP11.2□□□□□ -0.62
DDX41-203ENST00000504781 RAD51AP2Q09MP3 1159 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 MYBPC2Q14324 1141 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 TARBP2Q15633 366 aaKnown RBP11.2□□□□□ -0.62
DDX41-203ENST00000504781 NFIL3Q16649 462 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 EDRF1Q3B7T1 1238 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 DUSP28Q4G0W2 176 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 ODR4Q5SWX8 454 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 SFR1Q86XK3 245 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 FBXO16Q8IX29 292 aaPredicted RBP11.2□□□□□ -0.62
DDX41-203ENST00000504781 FAM178BQ8IXR5 827 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 DRC7Q8IY82 874 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
DDX41-203ENST00000504781 TMEM174Q8WUU8 243 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 SCFD1Q8WVM8 642 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 HPS3Q969F9 1004 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 CEP63Q96MT8 703 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 STRA6Q9BX79 667 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 XPO4Q9C0E2 1151 aaKnown RBP11.2□□□□□ -0.62
DDX41-203ENST00000504781 KCTD10Q9H3F6 313 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 CGNQ9P2M7 1197 aaKnown RBP11.2□□□□□ -0.62
DDX41-203ENST00000504781 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 ZSWIM8A7E2V4 1837 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 ZNF236Q9UL36 1845 aa11.2□□□□□ -0.62
DDX41-203ENST00000504781 UBE4BO95155 1302 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 EMSYQ7Z589 1322 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 RSPH10B2B2RC85 870 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 H0YCG3 227 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 TNPO2O14787 897 aaKnown RBP11.19□□□□□ -0.62
DDX41-203ENST00000504781 CALUO43852 315 aaPredicted RBP11.19□□□□□ -0.62
DDX41-203ENST00000504781 GAS2O43903 313 aaKnown RBP11.19□□□□□ -0.62
DDX41-203ENST00000504781 HBP1O60381 514 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 TPM2P07951 284 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 RSPH10BP0C881 870 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 ATP1A3P13637 1013 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 RPL13P26373 211 aaKnown RBP11.19□□□□□ -0.62
DDX41-203ENST00000504781 GRK4P32298 578 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 PMS1P54277 932 aaKnown RBP11.19□□□□□ -0.62
DDX41-203ENST00000504781 NPEPPSP55786 919 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 PRKCEQ02156 737 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 MAPK7Q13164 816 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 LRRC41Q15345 812 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 HSDL1Q3SXM5 330 aa11.19□□□□□ -0.62
DDX41-203ENST00000504781 UTP14CQ5TAP6 766 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms