RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 UBL4BQ8N7F7 174 aa9.32□□□□□ -0.92
CCDC149-204ENST00000504487 SLC44A5Q8NCS7 719 aa9.32□□□□□ -0.92
CCDC149-204ENST00000504487 FGD4Q96M96 766 aa9.32□□□□□ -0.92
CCDC149-204ENST00000504487 AK8Q96MA6 479 aa9.32□□□□□ -0.92
CCDC149-204ENST00000504487 CPVLQ9H3G5 476 aa9.32□□□□□ -0.92
CCDC149-204ENST00000504487 ARPP21Q9UBL0 812 aaPredicted RBP9.32□□□□□ -0.92
CCDC149-204ENST00000504487 ASAP2O43150 1006 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 SETSIPP0DME0 302 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 ATP4AP20648 1035 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 STAT1P42224 750 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 EXOC3L4Q17RC7 722 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 C6orf163Q5TEZ5 329 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 ARMC3Q5W041 872 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 MIS18BP1Q6P0N0 1132 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 PIK3R5Q8WYR1 880 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 RUNDC3BQ96NL0 473 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 EYA3Q99504 573 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 CCSER1Q9C0I3 900 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 RIC8AQ9NPQ8 531 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 ARMCX3Q9UH62 379 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 MYH10P35580 1976 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 COL5A2P05997 1499 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 SMCO2A6NFE2 343 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 TCP10L2B9ZVM9 353 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 SPOPO43791 374 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 AGTP01019 485 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 IFI35P80217 286 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 CACNB1Q02641 598 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 PFKFB3Q16875 520 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 TGS1Q96RS0 853 aaKnown RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 EDEM3Q9BZQ6 932 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 BZW2Q9Y6E2 419 aaKnown RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 A8MUI8 341 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 PJA2O43164 708 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 GNA14O95837 355 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 MECOMQ03112 1051 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 GRIK3Q13003 919 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 NEK8Q86SG6 692 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 GLG1Q92896 1179 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 THAP12O43422 761 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 BRAFP15056 766 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 MIIPQ5JXC2 388 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 C10orf76Q5T2E6 689 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 ARHGEF18Q6ZSZ5 1173 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 B4GALNT2Q8NHY0 566 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 LRRC8CQ8TDW0 803 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 DNAJC9Q8WXX5 260 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 INPP4AQ96PE3 977 aaPredicted RBP9.31□□□□□ -0.92
CCDC149-204ENST00000504487 TTYH3Q9C0H2 523 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 SEMA6BQ9H3T3 888 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 VCX3AQ9NNX9 186 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 PKD2L1Q9P0L9 805 aa9.31□□□□□ -0.92
CCDC149-204ENST00000504487 LAD1O00515 517 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 PFDN1O60925 122 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 SHBGP04278 402 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 KRT16P08779 473 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 XRCC5P13010 732 aaKnown RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 KRT15P19012 456 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 RCN2Q14257 317 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 CLEC4GQ6UXB4 293 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 UNC13DQ70J99 1090 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 ZNF34Q8IZ26 560 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 SCYL3Q8IZE3 742 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 GUF1Q8N442 669 aaKnown RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 C1orf131Q8NDD1 294 aaKnown RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 MTA3Q9BTC8 594 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 PABPC3Q9H361 631 aaKnown RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 KBTBD4Q9NVX7 518 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 INTUQ9ULD6 942 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 PCDHB13Q9Y5F0 798 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 FRMPD2Q68DX3 1309 aaPredicted RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 TMEM120BA0PK00 339 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 AHCYL1O43865 530 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 CREB3O43889 395 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 GFPT2O94808 682 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 IL9RQ01113 521 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 RIPK1Q13546 671 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 UAP1Q16222 522 aaPredicted RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 LONRF1Q17RB8 773 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 SEPT14Q6ZU15 432 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 CEP128Q6ZU80 1094 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 EPS8L3Q8TE67 593 aaKnown RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 DDX12PQ92771 950 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 LRRC37BQ96QE4 947 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 EBF2Q9HAK2 575 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 STOML1Q9UBI4 398 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 CAMTA1Q9Y6Y1 1673 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 NR2F2P24468 414 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 ARHGAP44Q17R89 818 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms