RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 SLC5A5Q92911 643 aa13.99□□□□□ -0.17
PDGFRA-204ENST00000504461 PPP1R16BQ96T49 567 aa13.99□□□□□ -0.17
PDGFRA-204ENST00000504461 NSUN3Q9H649 340 aaKnown RBP13.99□□□□□ -0.17
PDGFRA-204ENST00000504461 ERVK-5Q9HDB9 667 aa13.99□□□□□ -0.17
PDGFRA-204ENST00000504461 AKT3Q9Y243 479 aa13.99□□□□□ -0.17
PDGFRA-204ENST00000504461 NOC2LQ9Y3T9 749 aaKnown RBP13.99□□□□□ -0.17
PDGFRA-204ENST00000504461 PCDHB7Q9Y5E2 793 aa13.99□□□□□ -0.17
PDGFRA-204ENST00000504461 K7ELQ4 463 aaPredicted RBP13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 VTNP04004 478 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 OATP04181 439 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 KCNA5P22460 613 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 SARSP49591 514 aaKnown RBP13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 Q4G0T1 1027 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 PAN2Q504Q3 1202 aaKnown RBP13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 MIER3Q7Z3K6 550 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 CMTR2Q8IYT2 770 aaKnown RBP13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 DAGLBQ8NCG7 672 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 CLP1Q92989 425 aaKnown RBP13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 AIFM3Q96NN9 605 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 MAP7D2Q96T17 732 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 OSMRQ99650 979 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 ADAM2Q99965 735 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 PLVAPQ9BX97 442 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 LMAN2LQ9H0V9 348 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 TMX1Q9H3N1 280 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 UNC45AQ9H3U1 944 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 RC3H2Q9HBD1 1191 aaKnown RBP13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 BRMS1Q9HCU9 246 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 C1orf112Q9NSG2 853 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 ST3GAL5Q9UNP4 418 aa13.98□□□□□ -0.17
PDGFRA-204ENST00000504461 CYP3A7-CYP3A51PA0A087WV96 503 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 CCDC194A0A1B0GVG4 234 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 M0R2N6 131 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 GRM6O15303 877 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 EDIL3O43854 480 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 LARGE1O95461 756 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 TDP2O95551 362 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 FDPSP14324 419 aaKnown RBP13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 CYP3A7P24462 503 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 CLCN3P51790 818 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 NLRP11P59045 1033 aaKnown RBP13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 PRKCEQ02156 737 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 CUL4AQ13619 759 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 SAFBQ15424 915 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 SPOUT1Q5T280 376 aaKnown RBP13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 SLC24A5Q71RS6 500 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 KRT25Q7Z3Z0 450 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 TMEM40Q8WWA1 233 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 GJA10Q969M2 543 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 RGS18Q9NS28 235 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 KCNJ14Q9UNX9 436 aa13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 MRPL42Q9Y6G3 142 aaKnown RBP13.97□□□□□ -0.17
PDGFRA-204ENST00000504461 NCK2O43639 380 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 ZNF862O60290 1169 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 GPR32O75388 356 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 PSMD10O75832 226 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 PDCP20941 246 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 TBC1D8BQ0IIM8 1120 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 BECN1Q14457 450 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 INF2Q27J81 1249 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 LETM2Q2VYF4 491 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 LEXMQ3ZCV2 418 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 NAALADL2Q58DX5 795 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 MOXD1Q6UVY6 613 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 CRIPAKQ8N1N5 446 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 LRRC71Q8N4P6 559 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 P2RX5Q93086 422 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 SCLT1Q96NL6 688 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 PHF20Q9BVI0 1012 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 ALG13Q9NP73 1137 aaKnown RBP13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 DDX25Q9UHL0 483 aaKnown RBP13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 SMC3Q9UQE7 1217 aa13.96□□□□□ -0.17
PDGFRA-204ENST00000504461 VCANP13611 3396 aa13.96□□□□□ -0.18
PDGFRA-204ENST00000504461 MARCH6O60337 910 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 MGEA5O60502 916 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 CSPG5O95196 566 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 CD2BP2O95400 341 aaKnown RBP13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 LINC00271P0C7V0 271 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 ZSCAN20P17040 1043 aaPredicted RBP13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 UGCGQ16739 394 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 PUS10Q3MIT2 529 aaKnown RBP13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 FAM228AQ86W67 206 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 PABPC5Q96DU9 382 aaKnown RBP13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 AAASQ9NRG9 546 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 CLDND1Q9NY35 253 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 SEPT9Q9UHD8 586 aaPredicted RBP13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
PDGFRA-204ENST00000504461 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 DDX11L8A8MPP1 907 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 C9IYK1 514 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 MMP1P03956 469 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 HSP90AA1P07900 732 aaKnown RBP13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 GATMP50440 423 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 DNM2P50570 870 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms