RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ADAM2Q99965 735 aa18.35■□□□□ 0.53
SCLT1-204ENST00000503215 SH2D3AQ9BRG2 576 aa18.35■□□□□ 0.53
SCLT1-204ENST00000503215 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
SCLT1-204ENST00000503215 NLRC5Q86WI3 1866 aa18.35■□□□□ 0.53
SCLT1-204ENST00000503215 CRYBB1P53674 252 aaPredicted RBP18.34■□□□□ 0.53
SCLT1-204ENST00000503215 DRP2Q13474 957 aa18.34■□□□□ 0.53
SCLT1-204ENST00000503215 CAMK1Q14012 370 aa18.34■□□□□ 0.53
SCLT1-204ENST00000503215 NONOQ15233 471 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCLT1-204ENST00000503215 EARS2Q5JPH6 523 aaKnown RBP18.34■□□□□ 0.53
SCLT1-204ENST00000503215 ADAMTS10Q9H324 1103 aa18.34■□□□□ 0.53
SCLT1-204ENST00000503215 ALG13Q9NP73 1137 aaKnown RBP18.34■□□□□ 0.53
SCLT1-204ENST00000503215 WDR81Q562E7 1941 aa18.34■□□□□ 0.53
SCLT1-204ENST00000503215 FAM205CA6NFA0 338 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 EML1O00423 815 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 RB1P06400 928 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 FDPSP14324 419 aaKnown RBP18.33■□□□□ 0.53
SCLT1-204ENST00000503215 DNAJB1P25685 340 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 SARSP49591 514 aaKnown RBP18.33■□□□□ 0.53
SCLT1-204ENST00000503215 NLRP11P59045 1033 aaKnown RBP18.33■□□□□ 0.53
SCLT1-204ENST00000503215 TARBP2Q15633 366 aaKnown RBP18.33■□□□□ 0.53
SCLT1-204ENST00000503215 ME3Q16798 604 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 LETM2Q2VYF4 491 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 FAM102BQ5T8I3 360 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 GALNT17Q6IS24 598 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 MIER3Q7Z3K6 550 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 CMTR2Q8IYT2 770 aaKnown RBP18.33■□□□□ 0.53
SCLT1-204ENST00000503215 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.53
SCLT1-204ENST00000503215 FAM167AQ96KS9 214 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 CEP89Q96ST8 783 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 C22orf23Q9BZE7 217 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 CD320Q9NPF0 282 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 NRBP2Q9NSY0 501 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 HCSTQ9UBK5 93 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 DDX25Q9UHL0 483 aaKnown RBP18.33■□□□□ 0.53
SCLT1-204ENST00000503215 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.53
SCLT1-204ENST00000503215 C9IYK1 514 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 H3BQ06 376 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-204ENST00000503215 MAGEB2O15479 319 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 SFNP31947 248 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 JAK3P52333 1124 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 ANAPC15P60006 121 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 DSC3Q14574 896 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 TIGD5Q53EQ6 642 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 KRT25Q7Z3Z0 450 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 C11orf84Q9BUA3 381 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-204ENST00000503215 RGS18Q9NS28 235 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 ORC3Q9UBD5 711 aaPredicted RBP18.32■□□□□ 0.52
SCLT1-204ENST00000503215 LRFN2Q9ULH4 789 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 PLAGL2Q9UPG8 496 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 AKT3Q9Y243 479 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 STK36Q9NRP7 1315 aa18.32■□□□□ 0.52
SCLT1-204ENST00000503215 DENND3A2RUS2 1198 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 GPR182O15218 404 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 CSDE1O75534 798 aaKnown RBP18.31■□□□□ 0.52
SCLT1-204ENST00000503215 CDKL5O76039 1030 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 STAG3L1P0CL83 205 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 FGFR4P22455 802 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 GTF2F1P35269 517 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCLT1-204ENST00000503215 LEXMQ3ZCV2 418 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 MOXD1Q6UVY6 613 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 PIK3AP1Q6ZUJ8 805 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 NSUN3Q9H649 340 aaKnown RBP18.31■□□□□ 0.52
SCLT1-204ENST00000503215 PCDHB7Q9Y5E2 793 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 RALGAPA2Q2PPJ7 1873 aa18.31■□□□□ 0.52
SCLT1-204ENST00000503215 CCDC194A0A1B0GVG4 234 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 ITGB1P05556 798 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 FGFR1P11362 822 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 FAM189BP81408 668 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 MTERF2Q49AM1 385 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 EP400NLQ6ZTU2 488 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 SLC24A5Q71RS6 500 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 FAM177A1Q8N128 213 aaPredicted RBP18.3■□□□□ 0.52
SCLT1-204ENST00000503215 KLHL23Q8NBE8 558 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 SPPL3Q8TCT6 385 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 KHSRPQ92945 711 aaKnown RBP eCLIP18.3■□□□□ 0.521e-6■■■□□ 17.2
SCLT1-204ENST00000503215 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 NIFKQ9BYG3 293 aaKnown RBP18.3■□□□□ 0.52
SCLT1-204ENST00000503215 SEPT9Q9UHD8 586 aaPredicted RBP18.3■□□□□ 0.52
SCLT1-204ENST00000503215 VAV3Q9UKW4 847 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 RWDD3Q9Y3V2 267 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 ATG2AQ2TAZ0 1938 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 TBKBP1A7MCY6 615 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 IL9P15248 144 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 LTBRP36941 435 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 GPC3P51654 580 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 FOSBP53539 338 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 HYAL1Q12794 435 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 NR5A1Q13285 461 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 COL19A1Q14993 1142 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 RDM1Q8NG50 284 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 NEK9Q8TD19 979 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 HAS1Q92839 578 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 PLVAPQ9BX97 442 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 KCNMB3Q9NPA1 279 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 RNF19AQ9NV58 838 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 PCDHGC5Q9Y5F6 944 aa18.3■□□□□ 0.52
SCLT1-204ENST00000503215 DDX11L8A8MPP1 907 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 JAK2O60674 1132 aa18.29■□□□□ 0.52
SCLT1-204ENST00000503215 EIF4BP23588 611 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms