RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 IGKV6D-21A0A0A0MT36 114 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 FAM86C2PA6NEL3 165 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 C5orf67F2Z3F1 127 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 DHX15O43143 795 aaKnown RBP12.15□□□□□ -0.46
SNCA-207ENST00000502987 REC8O95072 547 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 HSPA4P34932 840 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 NLRP5P59047 1200 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
SNCA-207ENST00000502987 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 CCDC148Q8NFR7 591 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 NEK9Q8TD19 979 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 CLP1Q92989 425 aaKnown RBP12.15□□□□□ -0.46
SNCA-207ENST00000502987 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 ADAM2Q99965 735 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 LRFN3Q9BTN0 628 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 CDHR5Q9HBB8 845 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 CD320Q9NPF0 282 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 NOC2LQ9Y3T9 749 aaKnown RBP12.15□□□□□ -0.46
SNCA-207ENST00000502987 PCDHA10Q9Y5I2 948 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 MRPL42Q9Y6G3 142 aaKnown RBP12.15□□□□□ -0.46
SNCA-207ENST00000502987 COL1A2P08123 1366 aa12.15□□□□□ -0.46
SNCA-207ENST00000502987 KIAA1671Q9BY89 1806 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 COL4A6Q14031 1691 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 ATG2AQ2TAZ0 1938 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 IGLV3-22A0A075B6J6 115 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 ESYT2A0FGR8 921 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 ADAMTS3O15072 1205 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 GPR182O15218 404 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 VTNP04004 478 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 SARSP49591 514 aaKnown RBP12.14□□□□□ -0.47
SNCA-207ENST00000502987 GATMP50440 423 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNCA-207ENST00000502987 PKN1Q16512 942 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 ZNF746Q6NUN9 644 aaPredicted RBP12.14□□□□□ -0.47
SNCA-207ENST00000502987 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
SNCA-207ENST00000502987 TRIM22Q8IYM9 498 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
SNCA-207ENST00000502987 FAM122AQ96E09 287 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
SNCA-207ENST00000502987 NRBP2Q9NSY0 501 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 VPS54Q9P1Q0 977 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 ST3GAL5Q9UNP4 418 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 PLAGL2Q9UPG8 496 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 CEP131Q9UPN4 1083 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 HCN4Q9Y3Q4 1203 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 PCDHB12Q9Y5F1 795 aa12.14□□□□□ -0.47
SNCA-207ENST00000502987 KDM3AQ9Y4C1 1321 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 TBKBP1A7MCY6 615 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 PI4K2BG5E9Z4 385 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 CPLX1O14810 134 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 CHMP2AO43633 222 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 ATP4AP20648 1035 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 TMOD1P28289 359 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 NDUFV1P49821 464 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 CRYBB1P53674 252 aaPredicted RBP12.13□□□□□ -0.47
SNCA-207ENST00000502987 SSRP1Q08945 709 aaKnown RBP12.13□□□□□ -0.47
SNCA-207ENST00000502987 HYAL1Q12794 435 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 CSPP1Q1MSJ5 1256 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 KLHL23Q8NBE8 558 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 KCNB2Q92953 911 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 P2RX5Q93086 422 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 SCLT1Q96NL6 688 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 MAP7D2Q96T17 732 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 OSMRQ99650 979 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
SNCA-207ENST00000502987 TMX1Q9H3N1 280 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 RC3H2Q9HBD1 1191 aaKnown RBP12.13□□□□□ -0.47
SNCA-207ENST00000502987 ERVK-5Q9HDB9 667 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
SNCA-207ENST00000502987 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
SNCA-207ENST00000502987 FNDC1Q4ZHG4 1894 aaPredicted RBP12.12□□□□□ -0.47
SNCA-207ENST00000502987 WDR64B1ANS9 1081 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 MAGEB2O15479 319 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 MGEA5O60502 916 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 GAS7O60861 476 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 C22orf31O95567 290 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 MMP1P03956 469 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 ITGB1P05556 798 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 LINC00271P0C7V0 271 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 ALADP13716 330 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 IFNAR1P17181 557 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
SNCA-207ENST00000502987 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNCA-207ENST00000502987 CLCN3P51790 818 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 FAM102BQ5T8I3 360 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 RBM23Q86U06 439 aaKnown RBP12.12□□□□□ -0.47
SNCA-207ENST00000502987 SPPL3Q8TCT6 385 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 POF1BQ8WVV4 589 aa12.12□□□□□ -0.47
SNCA-207ENST00000502987 CRYGNQ8WXF5 182 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms