RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PWP2Q15269 919 aaKnown RBP24.21■■□□□ 1.47
PTPN13-205ENST00000502971 ZC2HC1CQ53FD0 456 aaPredicted RBP24.21■■□□□ 1.47
PTPN13-205ENST00000502971 SPRYD7Q5W111 196 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 GOLGA5Q8TBA6 731 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 HHIPL1Q96JK4 782 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 DNAJC7Q99615 494 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 METTL14Q9HCE5 456 aaKnown RBP24.21■■□□□ 1.47
PTPN13-205ENST00000502971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.21■■□□□ 1.47
PTPN13-205ENST00000502971 TLL2Q9Y6L7 1015 aa24.21■■□□□ 1.47
PTPN13-205ENST00000502971 TMEM88BA6NKF7 163 aa24.2■■□□□ 1.46
PTPN13-205ENST00000502971 ZNF862O60290 1169 aa24.2■■□□□ 1.46
PTPN13-205ENST00000502971 TSR1Q2NL82 804 aaKnown RBP24.2■■□□□ 1.46
PTPN13-205ENST00000502971 CYP26C1Q6V0L0 522 aa24.2■■□□□ 1.46
PTPN13-205ENST00000502971 CYFIP1Q7L576 1253 aa24.2■■□□□ 1.46
PTPN13-205ENST00000502971 PRIMPOLQ96LW4 560 aa24.2■■□□□ 1.46
PTPN13-205ENST00000502971 R3HDMLQ9H3Y0 253 aa24.2■■□□□ 1.46
PTPN13-205ENST00000502971 PPP2R2CQ9Y2T4 447 aa24.2■■□□□ 1.46
PTPN13-205ENST00000502971 MYH11P35749 1972 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 GOLGA6L9A6NEM1 432 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 PDHXO00330 501 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 NPEPPSP55786 919 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 CCNA1P78396 465 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 ZBED6P86452 979 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 NEDD9Q14511 834 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 PLA2G4FQ68DD2 849 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 RGMBQ6NW40 437 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 MAEAQ7L5Y9 396 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 HS2ST1Q7LGA3 356 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 ANKRD23Q86SG2 305 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 CCDC60Q8IWA6 550 aaPredicted RBP24.19■■□□□ 1.46
PTPN13-205ENST00000502971 ZNF397Q8NF99 534 aaPredicted RBP24.19■■□□□ 1.46
PTPN13-205ENST00000502971 GPRC5AQ8NFJ5 357 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 ST6GALNAC4Q9H4F1 302 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 ARMCX3Q9UH62 379 aaPredicted RBP24.19■■□□□ 1.46
PTPN13-205ENST00000502971 IGSF9BQ9UPX0 1349 aa24.19■■□□□ 1.46
PTPN13-205ENST00000502971 CCL15-CCL14A0A0B4J2E2 113 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 TMEM150BA6NC51 233 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 SOWAHDA6NJG2 315 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 K7ENM7 598 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 CYP2C8P10632 490 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 UBA1P22314 1058 aaKnown RBP24.18■■□□□ 1.46
PTPN13-205ENST00000502971 KLK7P49862 253 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 CCL15Q16663 113 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 KCNV1Q6PIU1 500 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 SMCR8Q8TEV9 937 aaPredicted RBP24.18■■□□□ 1.46
PTPN13-205ENST00000502971 CEP170P1Q96L14 293 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 GBP3Q9H0R5 595 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 TMEM206Q9H813 350 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 BTBD19C9JJ37 291 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 PGK2P07205 417 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 EPB41P11171 864 aaKnown RBP24.18■■□□□ 1.46
PTPN13-205ENST00000502971 ZNF157P51786 506 aaPredicted RBP24.18■■□□□ 1.46
PTPN13-205ENST00000502971 SP4Q02446 784 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 XKR3Q5GH77 459 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 TOGARAM2Q6ZUX3 1019 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 REXO1L1PQ8IX06 675 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 FGD4Q96M96 766 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 EDEM3Q9BZQ6 932 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 SYNGAP1Q96PV0 1343 aa24.18■■□□□ 1.46
PTPN13-205ENST00000502971 LRRC37A2A6NM11 1700 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 WDR81Q562E7 1941 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 PRKCEQ02156 737 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 MYBPC2Q14324 1141 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 RAD9BQ6WBX8 426 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 MORC4Q8TE76 937 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 SH2D3AQ9BRG2 576 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 MKNK1Q9BUB5 465 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 C17orf75Q9HAS0 396 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 ZNF302Q9NR11 478 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 TELO2Q9Y4R8 837 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 MAFBQ9Y5Q3 323 aaPredicted RBP24.17■■□□□ 1.46
PTPN13-205ENST00000502971 DOCK5Q9H7D0 1870 aa24.17■■□□□ 1.46
PTPN13-205ENST00000502971 IGKV6D-21A0A0A0MT36 114 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 CLIC2O15247 247 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 DGAT1O75907 488 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 AKAP3O75969 853 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 FARP2O94887 1054 aaPredicted RBP24.16■■□□□ 1.46
PTPN13-205ENST00000502971 GCLCP48506 637 aaPredicted RBP24.16■■□□□ 1.46
PTPN13-205ENST00000502971 FAM102BQ5T8I3 360 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 BRI3BPQ8WY22 251 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 KIFAP3Q92845 792 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 ACCSQ96QU6 501 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 MMRN2Q9H8L6 949 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 AGPAT5Q9NUQ2 364 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 ZNHIT6Q9NWK9 470 aaKnown RBP24.16■■□□□ 1.46
PTPN13-205ENST00000502971 CGNQ9P2M7 1197 aaKnown RBP24.16■■□□□ 1.46
PTPN13-205ENST00000502971 PAXBP1Q9Y5B6 917 aa24.16■■□□□ 1.46
PTPN13-205ENST00000502971 CCDC175P0C221 793 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 NCKAP1LP55160 1127 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 GTF2BQ00403 316 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 MTF1Q14872 753 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 MEA1Q16626 185 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 WDR78Q5VTH9 848 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 TRMT1LQ7Z2T5 733 aaKnown RBP24.15■■□□□ 1.46
PTPN13-205ENST00000502971 SLC9A9Q8IVB4 645 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 SYCP3Q8IZU3 236 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 MCPH1Q8NEM0 835 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 TMEM174Q8WUU8 243 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 CCDC102AQ96A19 550 aa24.15■■□□□ 1.46
PTPN13-205ENST00000502971 CYP26B1Q9NR63 512 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms