RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 MKS1Q9NXB0 559 aa8.39□□□□□ -1.07
NEDD4-203ENST00000502612 ZIM2Q9NZV7 527 aa8.39□□□□□ -1.07
NEDD4-203ENST00000502612 TMPRSS11EQ9UL52 423 aa8.39□□□□□ -1.07
NEDD4-203ENST00000502612 SCGB1D2O95969 90 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 CELA3BP08861 270 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 RBP3P10745 1247 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 TRIM25Q14258 630 aaKnown RBP8.38□□□□□ -1.07
NEDD4-203ENST00000502612 CLUL1Q15846 466 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 FSCN1Q16658 493 aaKnown RBP8.38□□□□□ -1.07
NEDD4-203ENST00000502612 ACAP3Q96P50 834 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 OR10A5Q9H207 317 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 DNAJC28Q9NX36 388 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 CROTQ9UKG9 612 aa8.38□□□□□ -1.07
NEDD4-203ENST00000502612 LUC7L2Q9Y383 392 aaKnown RBP8.38□□□□□ -1.07
NEDD4-203ENST00000502612 TRIM75PA6NK02 468 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 ETV2O00321 342 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-203ENST00000502612 XPOTO43592 962 aaKnown RBP8.37□□□□□ -1.07
NEDD4-203ENST00000502612 PCDH8O95206 1070 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 OSMP13725 252 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 UGT8Q16880 541 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.37□□□□□ -1.07
NEDD4-203ENST00000502612 KANK2Q63ZY3 851 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 PNMA8AQ86V59 439 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-203ENST00000502612 LYSMD2Q8IV50 215 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 KCNN1Q92952 543 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 ZBTB8AQ96BR9 441 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 BTBD2Q9BX70 525 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 EPB41L4AQ9HCS5 686 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-203ENST00000502612 KCND1Q9NSA2 647 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 IP6K2Q9UHH9 426 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 TCEAL9Q9UHQ7 104 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 MAGEL2Q9UJ55 1249 aa8.37□□□□□ -1.07
NEDD4-203ENST00000502612 PFKMP08237 780 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 ADCY8P40145 1251 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 CD83Q01151 205 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 MESP2Q0VG99 397 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 SSPNQ14714 243 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 ACAP2Q15057 778 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 PPP2R5AQ15172 486 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 AMOTL1Q8IY63 956 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 CALML6Q8TD86 181 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 SLC2A13Q96QE2 648 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 RHOBTB2Q9BYZ6 727 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 SLC13A1Q9BZW2 595 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 KCTD10Q9H3F6 313 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 MTG2Q9H4K7 406 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 SPEF1Q9Y4P9 236 aa8.36□□□□□ -1.07
NEDD4-203ENST00000502612 ZCCHC6Q5VYS8 1495 aaKnown RBP8.35□□□□□ -1.07
NEDD4-203ENST00000502612 ST20-MTHFSA0A0A6YYL1 179 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 TSPAN6O43657 245 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 ABLIM3O94929 683 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 CFBP00751 764 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 CCND1P24385 295 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 LGALS4P56470 323 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 HTRA3P83110 453 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 STILQ15468 1287 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 RGL3Q3MIN7 710 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 MCTP1Q6DN14 999 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 TTLL7Q6ZT98 887 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 SYDE1Q6ZW31 735 aaPredicted RBP8.35□□□□□ -1.07
NEDD4-203ENST00000502612 KCNK18Q7Z418 384 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 LINC00482Q8N8I6 264 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 KYQ8NBH2 561 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 CLIC6Q96NY7 704 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 CDH19Q9H159 772 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 PMF1-BGLAPU3KQ54 211 aa8.35□□□□□ -1.07
NEDD4-203ENST00000502612 MYPNQ86TC9 1320 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 COL6A1P12109 1028 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 APEX1P27695 318 aaKnown RBP8.34□□□□□ -1.07
NEDD4-203ENST00000502612 MTNR1BP49286 362 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 MLLT6P55198 1093 aaPredicted RBP8.34□□□□□ -1.07
NEDD4-203ENST00000502612 CCT2P78371 535 aaKnown RBP8.34□□□□□ -1.07
NEDD4-203ENST00000502612 ZCCHC14Q8WYQ9 949 aaKnown RBP8.34□□□□□ -1.07
NEDD4-203ENST00000502612 JADE3Q92613 823 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 TEKT5Q96M29 485 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 DPP7Q9UHL4 492 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 ZNF180Q9UJW8 692 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 DENND2AQ9ULE3 1009 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 NOB1Q9ULX3 412 aaKnown RBP8.34□□□□□ -1.07
NEDD4-203ENST00000502612 USP18Q9UMW8 372 aa8.34□□□□□ -1.07
NEDD4-203ENST00000502612 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
NEDD4-203ENST00000502612 OPHN1O60890 802 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 SNUPNO95149 360 aaKnown RBP8.33□□□□□ -1.08
NEDD4-203ENST00000502612 KRT1P04264 644 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 PI3P19957 117 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 ANTXR2P58335 489 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 PPARAQ07869 468 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 SLC41A1Q8IVJ1 513 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 FNIP1Q8TF40 1166 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 SIGLEC10Q96LC7 697 aa8.33□□□□□ -1.08
NEDD4-203ENST00000502612 PITHD1Q9GZP4 211 aaPredicted RBP8.33□□□□□ -1.08
NEDD4-203ENST00000502612 LUC7LQ9NQ29 371 aaKnown RBP8.33□□□□□ -1.08
NEDD4-203ENST00000502612 SPATA6Q9NWH7 488 aaPredicted RBP8.33□□□□□ -1.08
NEDD4-203ENST00000502612 ZRANB2O95218 330 aaKnown RBP eCLIP8.32□□□□□ -1.08
NEDD4-203ENST00000502612 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-203ENST00000502612 AGXTP21549 392 aa8.32□□□□□ -1.08
NEDD4-203ENST00000502612 CDK17Q00537 523 aa8.32□□□□□ -1.08
NEDD4-203ENST00000502612 WDR72Q3MJ13 1102 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms