RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 SLC16A3O15427 465 aaKnown RBP20.06■□□□□ 0.8
LINC00535-201ENST00000501400 PSAPP07602 524 aa20.06■□□□□ 0.8
LINC00535-201ENST00000501400 PLS3P13797 630 aa20.06■□□□□ 0.8
LINC00535-201ENST00000501400 ETF1P62495 437 aaKnown RBP20.06■□□□□ 0.8
LINC00535-201ENST00000501400 CCDC43Q96MW1 224 aaKnown RBP20.06■□□□□ 0.8
LINC00535-201ENST00000501400 MMRN2Q9H8L6 949 aa20.06■□□□□ 0.8
LINC00535-201ENST00000501400 FAM184BQ9ULE4 1060 aa20.06■□□□□ 0.8
LINC00535-201ENST00000501400 MCM3APO60318 1980 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 MAPTP10636 758 aaKnown RBP20.05■□□□□ 0.8
LINC00535-201ENST00000501400 OSBPP22059 807 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 SWSAP1Q6NVH7 229 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 SEPT14Q6ZU15 432 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 STXBP4Q6ZWJ1 553 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 ATP6V0A1Q93050 837 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 BORCS6Q96GS4 357 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 TIPINQ9BVW5 301 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 AGPAT3Q9NRZ7 376 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 LARSQ9P2J5 1176 aaKnown RBP20.05■□□□□ 0.8
LINC00535-201ENST00000501400 ARMCX3Q9UH62 379 aaPredicted RBP20.05■□□□□ 0.8
LINC00535-201ENST00000501400 PCDHB13Q9Y5F0 798 aa20.05■□□□□ 0.8
LINC00535-201ENST00000501400 ZNFX1Q9P2E3 1918 aaKnown RBP20.05■□□□□ 0.8
LINC00535-201ENST00000501400 SYNGAP1Q96PV0 1343 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 SUPT20HL2P0C7V6 817 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 UBA1P22314 1058 aaKnown RBP20.04■□□□□ 0.8
LINC00535-201ENST00000501400 RPL13P26373 211 aaKnown RBP20.04■□□□□ 0.8
LINC00535-201ENST00000501400 GTF2F1P35269 517 aaKnown RBP eCLIP20.04■□□□□ 0.8
LINC00535-201ENST00000501400 PRKCEQ02156 737 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 CYFIP1Q7L576 1253 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 KIF18AQ8NI77 898 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 BAP1Q92560 729 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 SLC10A4Q96EP9 437 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 REXO2Q9Y3B8 237 aaKnown RBP20.04■□□□□ 0.8
LINC00535-201ENST00000501400 DNAJC25-GNG10A0A024R161 153 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 NOL4O94818 638 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 PGK2P07205 417 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 HNRNPH3P31942 346 aaKnown RBP20.04■□□□□ 0.8
LINC00535-201ENST00000501400 KCNH2Q12809 1159 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 DRC1Q96MC2 740 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 GBP3Q9H0R5 595 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 DMAC2Q9NW81 257 aa20.04■□□□□ 0.8
LINC00535-201ENST00000501400 PHLPP2Q6ZVD8 1323 aa20.03■□□□□ 0.8
LINC00535-201ENST00000501400 SOCS7O14512 581 aa20.03■□□□□ 0.8
LINC00535-201ENST00000501400 ATG7O95352 703 aa20.03■□□□□ 0.8
LINC00535-201ENST00000501400 CYP2C8P10632 490 aa20.03■□□□□ 0.8
LINC00535-201ENST00000501400 COPB2P35606 906 aa20.03■□□□□ 0.8
LINC00535-201ENST00000501400 UNCXA6NJT0 531 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 NDUFA10O95299 355 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 TUBB4AP04350 444 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 EPB41P11171 864 aaKnown RBP20.02■□□□□ 0.8
LINC00535-201ENST00000501400 NCKAP1LP55160 1127 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 ERVK-9P63128 1117 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 ALCAMQ13740 583 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 MIS18BP1Q6P0N0 1132 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 HS2ST1Q7LGA3 356 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 SLC35C1Q96A29 364 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 MS4A4AQ96JQ5 239 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 CRACR2AQ9BSW2 395 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 LSM14BQ9BX40 385 aaKnown RBP20.02■□□□□ 0.8
LINC00535-201ENST00000501400 ST6GALNAC4Q9H4F1 302 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 PLAGL2Q9UPG8 496 aa20.02■□□□□ 0.8
LINC00535-201ENST00000501400 EPN1Q9Y6I3 576 aaPredicted RBP20.02■□□□□ 0.8
LINC00535-201ENST00000501400 DKC1O60832 514 aaKnown RBP eCLIP20.02■□□□□ 0.79
LINC00535-201ENST00000501400 FARP2O94887 1054 aaPredicted RBP20.02■□□□□ 0.79
LINC00535-201ENST00000501400 CDK17Q00537 523 aa20.02■□□□□ 0.79
LINC00535-201ENST00000501400 APBA1Q02410 837 aa20.02■□□□□ 0.79
LINC00535-201ENST00000501400 DPY19L2P1Q6NXN4 242 aa20.02■□□□□ 0.79
LINC00535-201ENST00000501400 ZNF397Q8NF99 534 aaPredicted RBP20.02■□□□□ 0.79
LINC00535-201ENST00000501400 NEK11Q8NG66 645 aa20.02■□□□□ 0.79
LINC00535-201ENST00000501400 CEP170P1Q96L14 293 aa20.02■□□□□ 0.79
LINC00535-201ENST00000501400 METTL14Q9HCE5 456 aaKnown RBP20.02■□□□□ 0.79
LINC00535-201ENST00000501400 LRRC53A6NM62 1247 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 TISP43B9A030 160 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 AFPP02771 609 aaKnown RBP20.01■□□□□ 0.79
LINC00535-201ENST00000501400 XRCC5P13010 732 aaKnown RBP20.01■□□□□ 0.79
LINC00535-201ENST00000501400 ATP4AP20648 1035 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 PEX3P56589 373 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 GTF2BQ00403 316 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 PPP2R3AQ06190 1150 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 TSR1Q2NL82 804 aaKnown RBP20.01■□□□□ 0.79
LINC00535-201ENST00000501400 FAM102BQ5T8I3 360 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 OTUD6AQ7L8S5 288 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 SLC9A9Q8IVB4 645 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 FAM186BQ8IYM0 893 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 BSNDQ8WZ55 320 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 WDR24Q96S15 920 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 MMP19Q99542 508 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 MKNK1Q9BUB5 465 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 PORCNQ9H237 461 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 GANQ9H2C0 597 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 XPNPEP1Q9NQW7 623 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 PDLIM7Q9NR12 457 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 SEPT9Q9UHD8 586 aaPredicted RBP20.01■□□□□ 0.79
LINC00535-201ENST00000501400 DNAI1Q9UI46 699 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 MAFBQ9Y5Q3 323 aaPredicted RBP20.01■□□□□ 0.79
LINC00535-201ENST00000501400 PLXNB2O15031 1838 aa20.01■□□□□ 0.79
LINC00535-201ENST00000501400 IGKV6D-21A0A0A0MT36 114 aa20■□□□□ 0.79
LINC00535-201ENST00000501400 ARHGAP25P42331 645 aa20■□□□□ 0.79
LINC00535-201ENST00000501400 SOX10P56693 466 aa20■□□□□ 0.79
LINC00535-201ENST00000501400 DCAF17Q5H9S7 520 aaPredicted RBP20■□□□□ 0.79
LINC00535-201ENST00000501400 PDXDC1Q6P996 788 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms