RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 CAPN8A6NHC0 703 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 GMPRP36959 345 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 CYP27A1Q02318 531 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 DUSP4Q13115 394 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 SWSAP1Q6NVH7 229 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 RBM12BQ8IXT5 1001 aaKnown RBP10.09□□□□□ -0.79
SNX13-212ENST00000498463 MARCH10Q8NA82 808 aaPredicted RBP10.09□□□□□ -0.79
SNX13-212ENST00000498463 WDR12Q9GZL7 423 aaKnown RBP10.09□□□□□ -0.79
SNX13-212ENST00000498463 NUP62CLQ9H1M0 184 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 DMRT3Q9NQL9 472 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 RIC8BQ9NVN3 520 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 FBLN5Q9UBX5 448 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 LIMCH1Q9UPQ0 1083 aa10.09□□□□□ -0.79
SNX13-212ENST00000498463 PRAMEF25A6NGN4 478 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
SNX13-212ENST00000498463 SLC27A2O14975 620 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 PIK3CBP42338 1070 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 CNN3Q15417 329 aaKnown RBP10.08□□□□□ -0.8
SNX13-212ENST00000498463 EMC4Q5J8M3 183 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 BTBD8Q5XKL5 378 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 STEAP3Q658P3 488 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 CYP4F22Q6NT55 531 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.08□□□□□ -0.8
SNX13-212ENST00000498463 SLC41A1Q8IVJ1 513 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 RIN2Q8WYP3 895 aaPredicted RBP10.08□□□□□ -0.8
SNX13-212ENST00000498463 LRTOMTQ8WZ04 291 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 MAML3Q96JK9 1138 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 JMJD8Q96S16 334 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 CGRRF1Q99675 332 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 ARFGAP3Q9NP61 516 aa10.08□□□□□ -0.8
SNX13-212ENST00000498463 UBA6A0AVT1 1052 aaPredicted RBP10.07□□□□□ -0.8
SNX13-212ENST00000498463 HMX2A2RU54 273 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 CCDC154A6NI56 674 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 ARHGEF15O94989 841 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 ESR1P03372 595 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 CEACAM5P06731 702 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 SRGNP10124 158 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 COL6A1P12109 1028 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 EDNRBP24530 442 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 LGALS4P56470 323 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 BCAR1P56945 870 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 TUSC3Q13454 348 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 ELF2Q15723 593 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 FBXL6Q8N531 539 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 LZTR1Q8N653 840 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 MYL10Q9BUA6 226 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 PDLIM7Q9NR12 457 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 TMPRSS11EQ9UL52 423 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 LRCH1Q9Y2L9 728 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 PCDHGB3Q9Y5G1 929 aa10.07□□□□□ -0.8
SNX13-212ENST00000498463 HTRA2O43464 458 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 MGEA5O60502 916 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 MAFKO60675 156 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 MMEP08473 750 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 TIGD7Q6NT04 549 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 CCDC174Q6PII3 467 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 GPR155Q7Z3F1 870 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 DPP9Q86TI2 863 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 SLCO6A1Q86UG4 719 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 RTN4RL1Q86UN2 441 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 TXNRD3Q86VQ6 643 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 ASB15Q8WXK1 588 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 ERCC4Q92889 916 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 FOXRED1Q96CU9 486 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 SCARF2Q96GP6 870 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 ACE2Q9BYF1 805 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 C7orf69Q9H7B7 122 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 SAGE1Q9NXZ1 904 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 GPRC5BQ9NZH0 403 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 TNFRSF10DQ9UBN6 386 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 PLAGL2Q9UPG8 496 aa10.06□□□□□ -0.8
SNX13-212ENST00000498463 LAS1LQ9Y4W2 734 aaKnown RBP10.06□□□□□ -0.8
SNX13-212ENST00000498463 ST20-MTHFSA0A0A6YYL1 179 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 FADS2P1A8MWK0 482 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 PRPF6O94906 941 aaKnown RBP10.05□□□□□ -0.8
SNX13-212ENST00000498463 APOL3O95236 402 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 CHKAP35790 457 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 IL6STP40189 918 aaPredicted RBP10.05□□□□□ -0.8
SNX13-212ENST00000498463 CORO7P57737 925 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 TRIM25Q14258 630 aaKnown RBP10.05□□□□□ -0.8
SNX13-212ENST00000498463 ANO4Q32M45 955 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 DAAM2Q86T65 1068 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 CILP2Q8IUL8 1156 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 LYSMD2Q8IV50 215 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 NLGN2Q8NFZ4 835 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 CCT6BQ92526 530 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 MAP6Q96JE9 813 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 HHIPL1Q96JK4 782 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 MFSD14AQ96MC6 490 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 TMX4Q9H1E5 349 aaPredicted RBP10.05□□□□□ -0.8
SNX13-212ENST00000498463 VPS11Q9H270 941 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 ZHX3Q9H4I2 956 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 NUMBLQ9Y6R0 609 aa10.05□□□□□ -0.8
SNX13-212ENST00000498463 TNFSF4P23510 183 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms