RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 DNAJC7Q99615 494 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 VCPKMTQ9H867 229 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 PARVGQ9HBI0 331 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 CEP72Q9P209 647 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 ZMYND8Q9ULU4 1186 aaPredicted RBP8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 SYNPO2Q9UMS6 1093 aa8.72□□□□□ -1.01
HLA-DMB-262ENST00000498020 ANO9A1A5B4 782 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 SERPING1P05155 500 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 MYBP10242 640 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 ERVK-24P63145 666 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 KNOP1Q1ED39 458 aaKnown RBP8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 TMEM119Q4V9L6 283 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 MAATS1Q7Z4T9 603 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 DEFB128Q7Z7B8 93 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 DUSP9Q99956 384 aaKnown RBP8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 JRKLQ9Y4A0 524 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 PCDHA13Q9Y5I0 950 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 SNED1Q8TER0 1413 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 INO80B-WBP1J3KQ70 363 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 EYA4O95677 639 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 SREBF1P36956 1147 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 SMTNP53814 917 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 ODR4Q5SWX8 454 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 GJA10Q969M2 543 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 MED15Q96RN5 788 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 PSMD1Q99460 953 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 INO80BQ9C086 356 aaPredicted RBP8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 AGPAT5Q9NUQ2 364 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 PARP2Q9UGN5 583 aa8.71□□□□□ -1.01
HLA-DMB-262ENST00000498020 MYH2Q9UKX2 1941 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 ENC1O14682 589 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 PRPF6O94906 941 aaKnown RBP8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 ELF1P32519 619 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 PSMC2P35998 433 aaKnown RBP8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 RGS2P41220 211 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 PRELPP51888 382 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 INHBEP58166 350 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 EDRF1Q3B7T1 1238 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 GPIHBP1Q8IV16 184 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 TMEM139Q8IV31 216 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 PROCA1Q8NCQ7 364 aaPredicted RBP8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 ZNF668Q96K58 619 aaPredicted RBP8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 EIF2AK1Q9BQI3 630 aaKnown RBP8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 SEMA6BQ9H3T3 888 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 EXOC7Q9UPT5 735 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 DENND3A2RUS2 1198 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 SPDYE2BA6NHP3 402 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 ADAMTS3O15072 1205 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 SPDYE6P0CI01 402 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 CTTNQ14247 550 aaKnown RBP8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 COBLL1Q53SF7 1204 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 KIAA0895Q8NCT3 520 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 CD99L2Q8TCZ2 262 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 NEK9Q8TD19 979 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 MMTAG2Q9BU76 263 aaKnown RBP8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 TUFT1Q9NNX1 390 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 TMEM39AQ9NV64 488 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 SEL1LQ9UBV2 794 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 CEP83Q9Y592 693 aa8.71□□□□□ -1.02
HLA-DMB-262ENST00000498020 KRT19P08727 400 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CYP11B2P19099 503 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 STAT1P42224 750 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 LMAN1P49257 510 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CFAP221Q4G0U5 840 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CEP55Q53EZ4 464 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 RMDN3Q96TC7 470 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 ADPGKQ9BRR6 497 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 TYW1Q9NV66 732 aaKnown RBP8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 LRRC53A6NM62 1247 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 PDXKO00764 312 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 KIF4AO95239 1232 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 BIRC3Q13489 604 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 FAM186BQ8IYM0 893 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 PRPF38AQ8NAV1 312 aaKnown RBP8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 STARD7Q9NQZ5 370 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 SSX2IPQ9Y2D8 614 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 TMX2Q9Y320 296 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 NRAPQ86VF7 1730 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 TNNC1P63316 161 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 LONRF2Q1L5Z9 754 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 Q4G0T1 1027 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 TATDN1Q6P1N9 297 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 DLK2Q6UY11 383 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CCDC77Q9BR77 488 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 PLAGL2Q9UPG8 496 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 PNMA6AP0CW24 399 aaPredicted RBP8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CYP2J2P51589 502 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CDK17Q00537 523 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 EPHA7Q15375 998 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 RNF187Q5TA31 235 aaPredicted RBP8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 PDXDC1Q6P996 788 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 CATSPER3Q86XQ3 398 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 SYT2Q8N9I0 419 aaPredicted RBP8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 PPP1R14CQ8TAE6 165 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 ZNF507Q8TCN5 953 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 PIGOQ8TEQ8 1089 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms