RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 DGKDQ16760 1214 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 HERC4Q5GLZ8 1057 aaPredicted RBP17.71■□□□□ 0.43
PTK7-220ENST00000497957 FAM102BQ5T8I3 360 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 KLHL10Q6JEL2 608 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 OTUD6AQ7L8S5 288 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 LUZP1Q86V48 1076 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 KSR1Q8IVT5 923 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 CCDC65Q8IXS2 484 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 AOPEPQ8N6M6 819 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 TRIML1Q8N9V2 468 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 FIZ1Q96SL8 496 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 NRBP2Q9NSY0 501 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 CTNND2Q9UQB3 1225 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 Q9Y3F1 56 aa17.71■□□□□ 0.43
PTK7-220ENST00000497957 H3BRB1 525 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 TBCAO75347 108 aaKnown RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 MYCNP04198 464 aaPredicted RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 INSRRP14616 1297 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 PMS1P54277 932 aaKnown RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 PRMT2P55345 433 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 EMC2Q15006 297 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 MTFR1Q15390 333 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 FAM26FQ5R3K3 315 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 DHX40Q8IX18 779 aaKnown RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 ASAP3Q8TDY4 903 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 BBXQ8WY36 941 aaPredicted RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 UNC93B1Q9H1C4 597 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 TUT1Q9H6E5 874 aaKnown RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 XPNPEP3Q9NQH7 507 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 RMND1Q9NWS8 449 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 ERAP1Q9NZ08 941 aa17.7■□□□□ 0.42
PTK7-220ENST00000497957 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
PTK7-220ENST00000497957 TRIM49BA6NDI0 452 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 RARBP10826 455 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 PSEN2P49810 448 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 ZNF165P49910 485 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 ZNF131P52739 623 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 PURAQ00577 322 aaKnown RBP17.69■□□□□ 0.42
PTK7-220ENST00000497957 ARHGEF6Q15052 776 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 LHX8Q68G74 356 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 ADSSL1Q8N142 457 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 LRRC71Q8N4P6 559 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 MYCT1Q8N699 235 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 FAM167AQ96KS9 214 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 KIFC3Q9BVG8 833 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 POLR3FQ9H1D9 316 aaPredicted RBP17.69■□□□□ 0.42
PTK7-220ENST00000497957 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
PTK7-220ENST00000497957 ATP6V0A4Q9HBG4 840 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 FRMPD3Q5JV73 1810 aa17.69■□□□□ 0.42
PTK7-220ENST00000497957 HAS3O00219 553 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 HBP1O60381 514 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 F2P00734 622 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 GJB1P08034 283 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 HOXD13P35453 343 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 CPT1AP50416 773 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 POLGP54098 1239 aaPredicted RBP17.68■□□□□ 0.42
PTK7-220ENST00000497957 ZNF200P98182 395 aaPredicted RBP17.68■□□□□ 0.42
PTK7-220ENST00000497957 MFSD10Q14728 455 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 NCAPHQ15003 741 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
PTK7-220ENST00000497957 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 CXCL17Q6UXB2 119 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 NELFCDQ8IXH7 590 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 MLKLQ8NB16 471 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 KLHDC9Q8NEP7 349 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 ZNF668Q96K58 619 aaPredicted RBP17.68■□□□□ 0.42
PTK7-220ENST00000497957 SETD4Q9NVD3 440 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 ODF2LQ9ULJ1 636 aa17.68■□□□□ 0.42
PTK7-220ENST00000497957 AP5Z1O43299 807 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 MAFO75444 373 aaPredicted RBP17.67■□□□□ 0.42
PTK7-220ENST00000497957 DGAT1O75907 488 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 PRPF6O94906 941 aaKnown RBP17.67■□□□□ 0.42
PTK7-220ENST00000497957 C22orf31O95567 290 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 SMIM10L2AP0DMW4 78 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 SMIM10L2BP0DMW5 78 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 CLCN3P51790 818 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 KCNA1Q09470 495 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 KIAA0753Q2KHM9 967 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 MARCH8Q5T0T0 291 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 CCSAPQ6IQ19 270 aaPredicted RBP17.67■□□□□ 0.42
PTK7-220ENST00000497957 FAM200AQ8TCP9 573 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 NELFBQ8WX92 580 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 SEMA6BQ9H3T3 888 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 COL4A3BPQ9Y5P4 624 aa17.67■□□□□ 0.42
PTK7-220ENST00000497957 GOLGA6L3A6NEY3 463 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 SLC16A4O15374 487 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 GAP43P17677 238 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 SLC26A2P50443 739 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 PEX3P56589 373 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 NKX3-2P78367 333 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 PPFIA1Q13136 1202 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 GRIK4Q16099 956 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 KCNA10Q16322 511 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 ODR4Q5SWX8 454 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 EPM2AIP1Q7L775 607 aaPredicted RBP17.66■□□□□ 0.42
PTK7-220ENST00000497957 SCFD1Q8WVM8 642 aa17.66■□□□□ 0.42
PTK7-220ENST00000497957 CCDC47Q96A33 483 aaKnown RBP17.66■□□□□ 0.42
PTK7-220ENST00000497957 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms