RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 MUM1L1Q5H9M0 696 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 HABP4Q5JVS0 413 aaKnown RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 TEX35Q5T0J7 233 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 MCTP1Q6DN14 999 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 ELMSAN1Q6PJG2 1045 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 DPP9Q86TI2 863 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 ZNF589Q86UQ0 364 aaPredicted RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 STK11IPQ8N1F8 1099 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 TXLNBQ8N3L3 684 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 TMEM102Q8N9M5 508 aaPredicted RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 ZNF397Q8NF99 534 aaPredicted RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 DIS3LQ8TF46 1054 aaKnown RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 DPF3Q92784 378 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 TCF12Q99081 682 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 NCAPGQ9BPX3 1015 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 TEX13BQ9BXU2 312 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 PRO3102Q9H379 93 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 SLC38A10Q9HBR0 1119 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 TCP11L1Q9NUJ3 509 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 CWC15Q9P013 229 aaKnown RBP7.53□□□□□ -1.2
HOXA9-206ENST00000497089 FRRS1LQ9P0K9 344 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 FEM1BQ9UK73 627 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 PAXBP1Q9Y5B6 917 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 TACC3Q9Y6A5 838 aa7.53□□□□□ -1.2
HOXA9-206ENST00000497089 PFASO15067 1338 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 CCDC171Q6TFL3 1326 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 LAMA4Q16363 1823 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 DNAJC25-GNG10A0A024R161 153 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 M0R082 166 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 CYP2C19P33261 490 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 OAZ1P54368 228 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
HOXA9-206ENST00000497089 PLS1Q14651 629 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 RABEP1Q15276 862 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 ZNF792Q3KQV3 632 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 FAM47AQ5JRC9 791 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 MEI1Q5TIA1 1274 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 SLFN13Q68D06 897 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 PSAPL1Q6NUJ1 521 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 HS2ST1Q7LGA3 356 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 MSL3Q8N5Y2 521 aaKnown RBP7.52□□□□□ -1.21
HOXA9-206ENST00000497089 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 TRPV1Q8NER1 839 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 KIF18AQ8NI77 898 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 ZNF417Q8TAU3 575 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 ASAP3Q8TDY4 903 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 NXPE3Q969Y0 559 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 MAML3Q96JK9 1138 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 ZNF587Q96SQ5 575 aaPredicted RBP7.52□□□□□ -1.21
HOXA9-206ENST00000497089 LPIN3Q9BQK8 851 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 C11orf49Q9H6J7 331 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 PRDM6Q9NQX0 595 aa7.52□□□□□ -1.21
HOXA9-206ENST00000497089 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
HOXA9-206ENST00000497089 TSPY2A6NKD2 308 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 HIP1O00291 1037 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 DNM1LO00429 736 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 SEPT4O43236 478 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 KIF1CO43896 1103 aaKnown RBP7.51□□□□□ -1.21
HOXA9-206ENST00000497089 RANBP6O60518 1105 aaKnown RBP7.51□□□□□ -1.21
HOXA9-206ENST00000497089 ZBED4O75132 1171 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 BMP3P12645 472 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 CALRP27797 417 aaKnown RBP7.51□□□□□ -1.21
HOXA9-206ENST00000497089 ATP11AP98196 1134 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 NCBP1Q09161 790 aaKnown RBP7.51□□□□□ -1.21
HOXA9-206ENST00000497089 KCTD2Q14681 263 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 ICE2Q659A1 982 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 SNRNP48Q6IEG0 339 aaKnown RBP7.51□□□□□ -1.21
HOXA9-206ENST00000497089 RCSD1Q6JBY9 416 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 MAMDC4Q6UXC1 1216 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 FAM160B2Q86V87 743 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 NT5DC4Q86YG4 428 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 LRRC47Q8N1G4 583 aaKnown RBP7.51□□□□□ -1.21
HOXA9-206ENST00000497089 MNS1Q8NEH6 495 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 CHST13Q8NET6 341 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 STAG1Q8WVM7 1258 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 RILPL2Q969X0 211 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 TTC14Q96N46 770 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 MMP19Q99542 508 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 TINF2Q9BSI4 451 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 BHLHE41Q9C0J9 482 aaPredicted RBP7.51□□□□□ -1.21
HOXA9-206ENST00000497089 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 INCENPQ9NQS7 918 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 USP25Q9UHP3 1055 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 PPM1HQ9ULR3 514 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 RIPK3Q9Y572 518 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 SMCHD1A6NHR9 2005 aa7.51□□□□□ -1.21
HOXA9-206ENST00000497089 ZNF536O15090 1300 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 A0A096LPE4 126 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 A0A1W2PPC1 479 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 A0A1W2PPZ6 126 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 NMT2O60551 498 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 RGS9O75916 674 aaPredicted RBP7.5□□□□□ -1.21
HOXA9-206ENST00000497089 TOP1P11387 765 aaKnown RBP7.5□□□□□ -1.21
HOXA9-206ENST00000497089 SLC1A4P43007 532 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 STAT2P52630 851 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 GPS2Q13227 327 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms