RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 JMJD7P0C870 316 aa6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ALDH6A1Q02252 535 aaKnown RBP6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 CDCA2Q69YH5 1023 aaPredicted RBP6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 UBE2R2Q712K3 238 aaPredicted RBP6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 OR14K1Q8NGZ2 314 aa6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PLA2G12BQ9BX93 195 aa6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PIF1Q9H611 641 aa6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 TMEM260Q9NX78 707 aa6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 MAGEL2Q9UJ55 1249 aa6.52□□□□□ -1.37
RAB3GAP1-206ENST00000497080 FSHBP01225 129 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 COMTP21964 271 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 RGS3P49796 1198 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 SLC6A3Q01959 620 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PABPC4Q13310 644 aaKnown RBP eCLIP6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PRKD1Q15139 912 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 C21orf62-AS1Q17RA5 79 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 Q6ZSN1 163 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 BCL6BQ8N143 479 aaPredicted RBP6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 FOXB1Q99853 325 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ACSS2Q9NR19 701 aa6.51□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ACO1P21399 889 aaKnown RBP6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 FLT3P36888 993 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 RANGAP1P46060 587 aaPredicted RBP6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 FNTBP49356 437 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 HGFACQ04756 655 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 MAP3K12Q12852 859 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 DUSP8Q13202 625 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 CFAP100Q494V2 611 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 KIAA1958Q8N8K9 716 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 E2F7Q96AV8 911 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 RNPC3Q96LT9 517 aaKnown RBP6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PCIF1Q9H4Z3 704 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 B4GALT6Q9UBX8 382 aa6.5□□□□□ -1.37
RAB3GAP1-206ENST00000497080 H7C1D1 291 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 CBX4O00257 560 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 AKAP8O43823 692 aaKnown RBP6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 RFPL3O75679 317 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 C6P13671 934 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 SLC9A1P19634 815 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PTX3P26022 381 aaPredicted RBP6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 RPS19P39019 145 aaKnown RBP6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ANTXR2P58335 489 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ROM1Q03395 351 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ADAM15Q13444 863 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ZNF174Q15697 407 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 POLNQ7Z5Q5 900 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 GPR135Q8IZ08 494 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 EDAQ92838 391 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 MAML3Q96JK9 1138 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ZNF747Q9BV97 191 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 VPS11Q9H270 941 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 SLC30A1Q9Y6M5 507 aa6.49□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PLSCR1O15162 318 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PRLP01236 227 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 CYP17A1P05093 508 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 TACR2P21452 398 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 FOXL1Q12952 345 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ACAP1Q15027 740 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 Q8N1X5 172 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 SLC16A11Q8NCK7 471 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 TUBGCP5Q96RT8 1024 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 AGO3Q9H9G7 860 aaKnown RBP6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 PLA2G3Q9NZ20 509 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 SAE1Q9UBE0 346 aaPredicted RBP6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 MAGEC2Q9UBF1 373 aaPredicted RBP6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 CD2APQ9Y5K6 639 aa6.48□□□□□ -1.37
RAB3GAP1-206ENST00000497080 UBA6A0AVT1 1052 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 MAFO75444 373 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 MSX2P35548 267 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ATP2C1P98194 919 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 NRN1LQ496H8 165 aa6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 TTC38Q5R3I4 469 aa6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 SLFN12LQ6IEE8 588 aa6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 CRIP3Q6Q6R5 217 aa6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 EXTL1Q92935 676 aa6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 TMEM176AQ96HP8 235 aa6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 ELF4Q99607 663 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 VWA7Q9Y334 891 aa6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-206ENST00000497080 SLC26A4O43511 780 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 STAT3P40763 770 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 NEK4P51957 841 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 GRM7Q14831 915 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 TCEA2Q15560 299 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 USP39Q53GS9 565 aaKnown RBP6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 PRAMEF9Q5VWM5 478 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 KLHDC10Q6PID8 442 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 MAMDC4Q6UXC1 1216 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 HOMER1Q86YM7 354 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 SYNPOQ8N3V7 929 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 SHCBP1Q8NEM2 672 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 FAM89AQ96GI7 184 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 SCAND2PQ9GZW5 306 aaPredicted RBP6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 NELFAQ9H3P2 528 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 OXSMQ9NWU1 459 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 DENND2AQ9ULE3 1009 aa6.46□□□□□ -1.38
RAB3GAP1-206ENST00000497080 C2orf78A6NCI8 922 aa6.45□□□□□ -1.38
RAB3GAP1-206ENST00000497080 H2AFYO75367 372 aaKnown RBP6.45□□□□□ -1.38
RAB3GAP1-206ENST00000497080 DGKDQ16760 1214 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms