RNA–Protein interactions for RNA: ENST00000496608.1

NFYC-219, Transcript of nuclear transcription factor Y subunit gamma, human

TSL 2

Gene NFYC, Length 1,965 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFYC-219	ENST00000496608	TXK	P42681	527 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	DNA2	P51530	1060 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	COASY	Q13057	564 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	ZNF268	Q14587	947 aa	Predicted RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	BTNL9	Q6UXG8	535 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	DYM	Q7RTS9	669 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	GBP7	Q8N8V2	638 aa	Predicted RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	FAM133A	Q8N9E0	248 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	DNAJC19	Q96DA6	116 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	FAXDC2	Q96IV6	333 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	FMO2	Q99518	471 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	NT5C3A	Q9H0P0	336 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	SEC63	Q9UGP8	760 aa	Known RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	NAGPA	Q9UK23	515 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	KDM3A	Q9Y4C1	1321 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	PHF20L1	A8MW92	1017 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	KLRF2	D3W0D1	207 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	CETN3	O15182	167 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	AGT	P01019	485 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	H2AFZ	P0C0S5	128 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	RNASE9	P60153	205 aa	Known RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	POU5F1	Q01860	360 aa	Known RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	DHX34	Q14147	1143 aa	Known RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	PPP1R7	Q15435	360 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	SPRED3	Q2MJR0	410 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	HYI	Q5T013	277 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	C6orf118	Q5T5N4	469 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	ALKBH5	Q6P6C2	394 aa	Known RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	H2AFV	Q71UI9	128 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	FRMD5	Q7Z6J6	570 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	SNX29	Q8TEQ0	813 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	HES6	Q96HZ4	224 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	PACSIN1	Q9BY11	444 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	VPS33B	Q9H267	617 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	MKNK2	Q9HBH9	465 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	PANK4	Q9NVE7	773 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	MCM9	Q9NXL9	1143 aa		13.92	□□□□□ -0.18
NFYC-219	ENST00000496608	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	3e-7	■■■□□ 14.6
NFYC-219	ENST00000496608	TSPY3	P0CV98	308 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	TSPY8	P0CW00	308 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	CYP2D6	P10635	497 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	ALAD	P13716	330 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	ZNF131	P52739	623 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	ADCY2	Q08462	1091 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	NAP1L4	Q99733	375 aa	Known RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	DDX47	Q9H0S4	455 aa	Known RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	PABPC3	Q9H361	631 aa	Known RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	WTIP	A6NIX2	430 aa	Predicted RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	LIN7A	O14910	233 aa	Predicted RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	BUB1B	O60566	1050 aa	Predicted RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	SSB	P05455	408 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	HSPA6	P17066	643 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	KLRK1	P26718	216 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	PTEN	P60484	403 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	PTK2	Q05397	1052 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	LRCH2	Q5VUJ6	765 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	DUPD1	Q68J44	220 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	NEK9	Q8TD19	979 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	SPAG5	Q96R06	1193 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	TMEM47	Q9BQJ4	181 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	MXD3	Q9BW11	206 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	AP1M1	Q9BXS5	423 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	COA1	Q9GZY4	146 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	PARP2	Q9UGN5	583 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	AMACR	Q9UHK6	382 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	AMFR	Q9UKV5	643 aa		13.91	□□□□□ -0.18
NFYC-219	ENST00000496608	MME	P08473	750 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	E2F5	Q15329	346 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	TRPM8	Q7Z2W7	1104 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	NT5DC3	Q86UY8	548 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	NOP53	Q9NZM5	478 aa	Known RBP	13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	BAIAP2L1	Q9UHR4	511 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	RASAL2	Q9UJF2	1139 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	C15orf41	Q9Y2V0	281 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	DAAM1	Q9Y4D1	1078 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	FER1L6	Q2WGJ9	1857 aa		13.9	□□□□□ -0.18
NFYC-219	ENST00000496608	TTI1	O43156	1089 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	IL1R1	P14778	569 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	CCND1	P24385	295 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	FLT3	P36888	993 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	KCNH2	Q12809	1159 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	DENND2C	Q68D51	928 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	DPY19L2P1	Q6NXN4	242 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	PPP1R18	Q6NYC8	613 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	TXNRD3	Q86VQ6	643 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	ERP44	Q9BS26	406 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	CARD9	Q9H257	536 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	KCTD10	Q9H3F6	313 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	NCAN	O14594	1321 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	PITPNM2	Q9BZ72	1349 aa		13.89	□□□□□ -0.19
NFYC-219	ENST00000496608	GTPBP10	A4D1E9	387 aa	Known RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms