RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SOX10P56693 466 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 AMPD3Q01432 767 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 SNX17Q15036 470 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 LONRF3Q496Y0 759 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 RINT1Q6NUQ1 792 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 CNNM3Q8NE01 707 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 ATP6V0A4Q9HBG4 840 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 KBTBD4Q9NVX7 518 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 NOD1Q9Y239 953 aa24.2■■□□□ 1.46
C9orf3-222ENST00000496567 USO1O60763 962 aaKnown RBP24.19■■□□□ 1.46
C9orf3-222ENST00000496567 KINO60870 393 aaKnown RBP24.19■■□□□ 1.46
C9orf3-222ENST00000496567 HIC1Q14526 733 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 PTGISQ16647 500 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 KANK3Q6NY19 840 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 KRBA2Q6ZNG9 492 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 GPBP1Q86WP2 473 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 MCPH1Q8NEM0 835 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 TIGD1Q96MW7 591 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 BMP2KQ9NSY1 1161 aaPredicted RBP24.19■■□□□ 1.46
C9orf3-222ENST00000496567 PCDHA2Q9Y5H9 948 aa24.19■■□□□ 1.46
C9orf3-222ENST00000496567 TREHO43280 583 aa24.18■■□□□ 1.46
C9orf3-222ENST00000496567 CYP11B2P19099 503 aa24.18■■□□□ 1.46
C9orf3-222ENST00000496567 TMOD1P28289 359 aa24.18■■□□□ 1.46
C9orf3-222ENST00000496567 ZNF200P98182 395 aaPredicted RBP24.18■■□□□ 1.46
C9orf3-222ENST00000496567 EMC2Q15006 297 aa24.18■■□□□ 1.46
C9orf3-222ENST00000496567 C1orf186Q6ZWK4 172 aa24.18■■□□□ 1.46
C9orf3-222ENST00000496567 MTRQ99707 1265 aa24.18■■□□□ 1.46
C9orf3-222ENST00000496567 TIPINQ9BVW5 301 aa24.18■■□□□ 1.46
C9orf3-222ENST00000496567 IGKV6-21A0A0C4DH24 114 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 TLR3O15455 904 aaKnown RBP24.17■■□□□ 1.46
C9orf3-222ENST00000496567 MBD3O95983 291 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 CYP2C9P11712 490 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 DNM2P50570 870 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 EFCAB12Q6NXP0 572 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 TAF2Q6P1X5 1199 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 ANKRD33Q7Z3H0 272 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 METTL13Q8N6R0 699 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 TOX2Q96NM4 488 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 RUSC1Q9BVN2 902 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 PDLIM7Q9NR12 457 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 DACT1Q9NYF0 836 aa24.17■■□□□ 1.46
C9orf3-222ENST00000496567 RPLP2P05387 115 aaKnown RBP24.16■■□□□ 1.46
C9orf3-222ENST00000496567 FAM126BQ8IXS8 530 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 TCP11Q8WWU5 503 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 SUGCTQ9HAC7 445 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 TRMT13Q9NUP7 481 aaKnown RBP24.16■■□□□ 1.46
C9orf3-222ENST00000496567 SMIM35A0A1B0GVV1 85 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 DCDC2CA8MYV0 355 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 B4GALT4O60513 344 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 KRT18P05783 430 aaKnown RBP24.16■■□□□ 1.46
C9orf3-222ENST00000496567 GUCY2CP25092 1073 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 PTK7Q13308 1070 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 SERINC5Q86VE9 423 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 PAGE5Q96GU1 130 aa24.16■■□□□ 1.46
C9orf3-222ENST00000496567 HOOK1Q9UJC3 728 aaKnown RBP24.16■■□□□ 1.46
C9orf3-222ENST00000496567 PQBP1O60828 265 aaKnown RBP24.15■■□□□ 1.46
C9orf3-222ENST00000496567 MYL1P05976 194 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 AFMP43652 599 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 RTP1P59025 263 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 TRIM60Q495X7 471 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 ARSHQ5FYA8 562 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 IER5Q5VY09 327 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 LRRC71Q8N4P6 559 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 STAMQ92783 540 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 ZBTB10Q96DT7 871 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 TRPV6Q9H1D0 765 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 XPNPEP1Q9NQW7 623 aa24.15■■□□□ 1.46
C9orf3-222ENST00000496567 MYMKA6NI61 221 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 CD4P01730 458 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 LRRC26Q2I0M4 334 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 ELOA2Q8IYF1 753 aaPredicted RBP24.14■■□□□ 1.45
C9orf3-222ENST00000496567 LINC01465Q8N7H1 131 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 DDX12PQ92771 950 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 MAP7D2Q96T17 732 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 ODF2LQ9ULJ1 636 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 ATP11BQ9Y2G3 1177 aa24.14■■□□□ 1.45
C9orf3-222ENST00000496567 TRIP12Q14669 1992 aaPredicted RBP24.14■■□□□ 1.45
C9orf3-222ENST00000496567 CLCN3P51790 818 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 TLE2Q04725 743 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 FAM102BQ5T8I3 360 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 RUFY4Q6ZNE9 571 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 MAEAQ7L5Y9 396 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 SH3RF1Q7Z6J0 888 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 RSPH3Q86UC2 560 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 NME8Q8N427 588 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 GPT2Q8TD30 523 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 KIFAP3Q92845 792 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 DRC1Q96MC2 740 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 CTAGE1Q96RT6 745 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 C7orf25Q9BPX7 421 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 TRIM9Q9C026 710 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 DNAH12Q6ZR08 3092 aa24.13■■□□□ 1.45
C9orf3-222ENST00000496567 RAD51AP2Q09MP3 1159 aa24.12■■□□□ 1.45
C9orf3-222ENST00000496567 CNNM4Q6P4Q7 775 aa24.12■■□□□ 1.45
C9orf3-222ENST00000496567 DYMQ7RTS9 669 aa24.12■■□□□ 1.45
C9orf3-222ENST00000496567 KIAA0319LQ8IZA0 1049 aa24.12■■□□□ 1.45
C9orf3-222ENST00000496567 PSPC1Q8WXF1 523 aaKnown RBP24.12■■□□□ 1.45
C9orf3-222ENST00000496567 TMEM143Q96AN5 459 aa24.12■■□□□ 1.45
C9orf3-222ENST00000496567 FAM49AQ9H0Q0 323 aaPredicted RBP24.12■■□□□ 1.45
C9orf3-222ENST00000496567 SUCLA2Q9P2R7 463 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms