RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 A0A1B0GVG6 124 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 CSF1RP07333 972 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 YY1P25490 414 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 HOXA10P31260 410 aaPredicted RBP9.82□□□□□ -0.84
HPS4-217ENST00000496385 RPS8P62241 208 aaKnown RBP9.82□□□□□ -0.84
HPS4-217ENST00000496385 GRAPQ13588 217 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 ACVR2BQ13705 512 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 KPNB1Q14974 876 aaKnown RBP9.82□□□□□ -0.84
HPS4-217ENST00000496385 TYW1BQ6NUM6 668 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 GRAPLQ8TC17 118 aaPredicted RBP9.82□□□□□ -0.84
HPS4-217ENST00000496385 SYN2Q92777 582 aaPredicted RBP9.82□□□□□ -0.84
HPS4-217ENST00000496385 PLA2G12BQ9BX93 195 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 ADAM7Q9H2U9 754 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 DCLRE1BQ9H816 532 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 LY9Q9HBG7 655 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 CABP5Q9NP86 173 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 GALNT8Q9NY28 637 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 STOML1Q9UBI4 398 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 COMMD3-BMI1R4GMX3 469 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 DLEC1Q9Y238 1755 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 DCDC2CA8MYV0 355 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 PEX11AO75192 247 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 TMCC1O94876 653 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 IL15P40933 162 aaPredicted RBP9.82□□□□□ -0.84
HPS4-217ENST00000496385 RFC5P40937 340 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 OCRLQ01968 901 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 DHX9Q08211 1270 aaKnown RBP9.82□□□□□ -0.84
HPS4-217ENST00000496385 SPDYAQ5MJ70 313 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 RNF220Q5VTB9 566 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 ZNF365Q70YC5 407 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 GBP5Q96PP8 586 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 HAPLN3Q96S86 360 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 LRMDAQ9H2I8 198 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 WDR37Q9Y2I8 494 aa9.82□□□□□ -0.84
HPS4-217ENST00000496385 A8MUI8 341 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 ECE2O60344 883 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 RHOBTB3O94955 611 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 PDHA1P08559 390 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 GSTT1P30711 240 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 ATP2C1P98194 919 aaPredicted RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 TRADDQ15628 312 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 CYB5R4Q7L1T6 521 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 TMTC2Q8N394 836 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 NR1H4Q96RI1 486 aaPredicted RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 CRAMP1Q96RY5 1269 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 LZTS2Q9BRK4 669 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 NOC4LQ9BVI4 516 aaKnown RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 AIPL1Q9NZN9 384 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 PRKAG3Q9UGI9 489 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 SALL4Q9UJQ4 1053 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 PALMO75781 387 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 ECEL1O95672 775 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 EYA4O95677 639 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 CCNE1P24864 410 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 HOXA7P31268 230 aaPredicted RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 VHLP40337 213 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 RASSF2P50749 326 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 LRRC24Q50LG9 513 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 COBLL1Q53SF7 1204 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 TNFAIP8L3Q5GJ75 292 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 KLHL7Q8IXQ5 586 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 RNF168Q8IYW5 571 aaPredicted RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 SYCP3Q8IZU3 236 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 CSGALNACT2Q8N6G5 542 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 GIMAP8Q8ND71 665 aaPredicted RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 KCNV2Q8TDN2 545 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 IRGQQ8WZA9 623 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 ZNF333Q96JL9 665 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 NAP1L3Q99457 506 aaPredicted RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 PRMT1Q99873 361 aaKnown RBP9.81□□□□□ -0.84
HPS4-217ENST00000496385 SELENOSQ9BQE4 189 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 BLZF1Q9H2G9 400 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 ITGB1BP2Q9UKP3 347 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 KCNJ14Q9UNX9 436 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 RIC1Q4ADV7 1423 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 MYH1P12882 1939 aa9.81□□□□□ -0.84
HPS4-217ENST00000496385 RGS16O15492 202 aaPredicted RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 MTIF2P46199 727 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 TRAPPC10P48553 1259 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 NR5A1Q13285 461 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 RASA3Q14644 834 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 RPS6KA1Q15418 735 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 MUM1Q2TAK8 710 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 MIIPQ5JXC2 388 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 C10orf76Q5T2E6 689 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 CRACR2BQ8N4Y2 399 aaPredicted RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 PABPC3Q9H361 631 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 IL1RAPL1Q9NZN1 696 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 GDAQ9Y2T3 454 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 UTP11Q9Y3A2 253 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 POTEFA5A3E0 1075 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 PALM3A6NDB9 673 aaPredicted RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 PGRMC1O00264 195 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 NVLO15381 856 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 COBLO75128 1261 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 ATP6V1G1O75348 118 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 PLEKP08567 350 aaPredicted RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 POTEIP0CG38 1075 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 POTEJP0CG39 1038 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 IGHMBP2P38935 993 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms