RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TRMT1LQ7Z2T5 733 aaKnown RBP25.01■■□□□ 1.59
HDDC3-203ENST00000494993 ADGRD2Q7Z7M1 963 aa25.01■■□□□ 1.59
HDDC3-203ENST00000494993 FAM228AQ86W67 206 aa25.01■■□□□ 1.59
HDDC3-203ENST00000494993 METTL13Q8N6R0 699 aa25.01■■□□□ 1.59
HDDC3-203ENST00000494993 LENG9Q96B70 501 aa25.01■■□□□ 1.59
HDDC3-203ENST00000494993 CEP131Q9UPN4 1083 aa25.01■■□□□ 1.59
HDDC3-203ENST00000494993 MUC6Q6W4X9 2439 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 TBKBP1A7MCY6 615 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 GPR32O75388 356 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 VTNP04004 478 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 NDUFV1P49821 464 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 EFHBQ8N7U6 833 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 FAM167AQ96KS9 214 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 SLC26A6Q9BXS9 759 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 SAMM50Q9Y512 469 aa25■■□□□ 1.59
HDDC3-203ENST00000494993 PPFIA3O75145 1194 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 IFNAR1P17181 557 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 CLCN3P51790 818 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 SPOUT1Q5T280 376 aaKnown RBP24.99■■□□□ 1.59
HDDC3-203ENST00000494993 FAM102BQ5T8I3 360 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 MSLNLQ96KJ4 702 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 POP1Q99575 1024 aaKnown RBP24.99■■□□□ 1.59
HDDC3-203ENST00000494993 AAASQ9NRG9 546 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 VPS54Q9P1Q0 977 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 PCDHB12Q9Y5F1 795 aa24.99■■□□□ 1.59
HDDC3-203ENST00000494993 WDR64B1ANS9 1081 aa24.98■■□□□ 1.59
HDDC3-203ENST00000494993 MAGEB2O15479 319 aa24.98■■□□□ 1.59
HDDC3-203ENST00000494993 PSMA5P28066 241 aa24.98■■□□□ 1.59
HDDC3-203ENST00000494993 UPF3BQ9BZI7 483 aaKnown RBP24.98■■□□□ 1.59
HDDC3-203ENST00000494993 TMEM161AQ9NX61 479 aa24.98■■□□□ 1.59
HDDC3-203ENST00000494993 EDIL3O43854 480 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 NRIP1P48552 1158 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 FAM189BP81408 668 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 UBE3AQ05086 875 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 DSC3Q14574 896 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 CSPP1Q1MSJ5 1256 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 LINC01465Q8N7H1 131 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 ELAC1Q9H777 363 aaKnown RBP24.97■■□□□ 1.59
HDDC3-203ENST00000494993 ATP6V0A4Q9HBG4 840 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 CLEC1BQ9P126 229 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 AKT3Q9Y243 479 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 PCDHGC5Q9Y5F6 944 aa24.97■■□□□ 1.59
HDDC3-203ENST00000494993 MSH4O15457 936 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 ZNF862O60290 1169 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 EYA4O95677 639 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 PDIA3P30101 505 aaKnown RBP24.96■■□□□ 1.59
HDDC3-203ENST00000494993 EVCP57679 992 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 CCT2P78371 535 aaKnown RBP24.96■■□□□ 1.59
HDDC3-203ENST00000494993 EFCAB12Q6NXP0 572 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 RBM23Q86U06 439 aaKnown RBP24.96■■□□□ 1.59
HDDC3-203ENST00000494993 COLGALT1Q8NBJ5 622 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 CCDC136Q96JN2 1154 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 MAP7D2Q96T17 732 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 NCOA5Q9HCD5 579 aaKnown RBP24.96■■□□□ 1.59
HDDC3-203ENST00000494993 DISC1Q9NRI5 854 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 TYW1Q9NV66 732 aaKnown RBP24.96■■□□□ 1.59
HDDC3-203ENST00000494993 HCSTQ9UBK5 93 aa24.96■■□□□ 1.59
HDDC3-203ENST00000494993 REC8O95072 547 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 GLP2RO95838 553 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 OATP04181 439 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 FGFR1P11362 822 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 TMOD1P28289 359 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 HOXD11P31277 338 aaPredicted RBP24.95■■□□□ 1.58
HDDC3-203ENST00000494993 USP11P51784 963 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 NLRP11P59045 1033 aaKnown RBP24.95■■□□□ 1.58
HDDC3-203ENST00000494993 LRRC71Q8N4P6 559 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 SMRP1Q8NCR6 262 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 RIT2Q99578 217 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 CWH43Q9H720 699 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 SH3GLB2Q9NR46 395 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 TLR9Q9NR96 1032 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 NRBP2Q9NSY0 501 aa24.95■■□□□ 1.58
HDDC3-203ENST00000494993 FGF18O76093 207 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 PRKCEQ02156 737 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 COASYQ13057 564 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 THNSL1Q8IYQ7 743 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 ZNF710Q8N1W2 664 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 SLC5A5Q92911 643 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 TEKT3Q9BXF9 490 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 ADAMTS10Q9H324 1103 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 TRIOO75962 3097 aa24.94■■□□□ 1.58
HDDC3-203ENST00000494993 ZNF318Q5VUA4 2279 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 GAS7O60861 476 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 LAG3P18627 525 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 SFNP31947 248 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 JAK3P52333 1124 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 NLRP5P59047 1200 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 UGCGQ16739 394 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 LRCH2Q5VUJ6 765 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 MICAL1Q8TDZ2 1067 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 TMEM117Q9H0C3 514 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 TLE6Q9H808 572 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 BARX2Q9UMQ3 279 aaPredicted RBP24.93■■□□□ 1.58
HDDC3-203ENST00000494993 TECTAO75443 2155 aa24.93■■□□□ 1.58
HDDC3-203ENST00000494993 CHMP2AO43633 222 aa24.92■■□□□ 1.58
HDDC3-203ENST00000494993 EIF4BP23588 611 aaKnown RBP24.92■■□□□ 1.58
HDDC3-203ENST00000494993 TOB2Q14106 344 aaPredicted RBP24.92■■□□□ 1.58
HDDC3-203ENST00000494993 TRIM22Q8IYM9 498 aa24.92■■□□□ 1.58
HDDC3-203ENST00000494993 TBCKQ8TEA7 893 aa24.92■■□□□ 1.58
HDDC3-203ENST00000494993 UNC45AQ9H3U1 944 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms