RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 FERMT3Q86UX7 667 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 HERC6Q8IVU3 1022 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 MYOCDQ8IZQ8 938 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 TET1Q8NFU7 2136 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 SLC7A3Q8WY07 619 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 HSD17B14Q9BPX1 270 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 RAB34Q9BZG1 259 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 PPME1Q9Y570 386 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 PCDHA11Q9Y5I1 949 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 WDR81Q562E7 1941 aa17.82■□□□□ 0.44
LIME1-209ENST00000494776 TLL1O43897 1013 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 MAFO75444 373 aaPredicted RBP17.81■□□□□ 0.44
LIME1-209ENST00000494776 RPS6KA5O75582 802 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 SYT1P21579 422 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 CRYBB1P53674 252 aaPredicted RBP17.81■□□□□ 0.44
LIME1-209ENST00000494776 NLRP11P59045 1033 aaKnown RBP17.81■□□□□ 0.44
LIME1-209ENST00000494776 NFX1Q12986 1120 aaKnown RBP17.81■□□□□ 0.44
LIME1-209ENST00000494776 ODR4Q5SWX8 454 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 FAM117BQ6P1L5 589 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.81■□□□□ 0.44
LIME1-209ENST00000494776 ZNF710Q8N1W2 664 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 C4orf32Q8N8J7 132 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 OSMRQ99650 979 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 NKX2-4Q9H2Z4 354 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 AGO3Q9H9G7 860 aaKnown RBP17.81■□□□□ 0.44
LIME1-209ENST00000494776 SLC28A3Q9HAS3 691 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 CDHR5Q9HBB8 845 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.81■□□□□ 0.44
LIME1-209ENST00000494776 LRWD1Q9UFC0 647 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 PADI3Q9ULW8 664 aa17.81■□□□□ 0.44
LIME1-209ENST00000494776 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 ZBTB39O15060 712 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 GPR32O75388 356 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 MYOGP15173 224 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 RFC5P40937 340 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 FXR2P51116 673 aaKnown RBP eCLIP17.8■□□□□ 0.44
LIME1-209ENST00000494776 HAUS3Q68CZ6 603 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 DTHD1Q6ZMT9 781 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 TMCO2Q7Z6W1 182 aaPredicted RBP17.8■□□□□ 0.44
LIME1-209ENST00000494776 LINC01465Q8N7H1 131 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 NLRP7Q8WX94 980 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 ZNF668Q96K58 619 aaPredicted RBP17.8■□□□□ 0.44
LIME1-209ENST00000494776 CEP89Q96ST8 783 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 SEMA6BQ9H3T3 888 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 ZNF576Q9H609 170 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 TUFT1Q9NNX1 390 aa17.8■□□□□ 0.44
LIME1-209ENST00000494776 SUCLA2Q9P2R7 463 aaPredicted RBP17.8■□□□□ 0.44
LIME1-209ENST00000494776 YBX2Q9Y2T7 364 aaKnown RBP17.8■□□□□ 0.44
LIME1-209ENST00000494776 GPR182O15218 404 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 UPP2O95045 317 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 LYPLA2O95372 231 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 CCT6AP40227 531 aaKnown RBP17.79■□□□□ 0.44
LIME1-209ENST00000494776 PRPHP41219 470 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 CDC42EP1Q00587 391 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 PDIA5Q14554 519 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 CATSPER3Q86XQ3 398 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 RHPN2Q8IUC4 686 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 ZNF579Q8NAF0 562 aaKnown RBP17.79■□□□□ 0.44
LIME1-209ENST00000494776 PIGOQ8TEQ8 1089 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 POLR3CQ9BUI4 534 aaPredicted RBP17.79■□□□□ 0.44
LIME1-209ENST00000494776 FTHL17Q9BXU8 183 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 BMP2KQ9NSY1 1161 aaPredicted RBP17.79■□□□□ 0.44
LIME1-209ENST00000494776 ANKEF1Q9NU02 776 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 NOC2LQ9Y3T9 749 aaKnown RBP17.79■□□□□ 0.44
LIME1-209ENST00000494776 STK24Q9Y6E0 443 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 EVPLQ92817 2033 aa17.79■□□□□ 0.44
LIME1-209ENST00000494776 IGKV6-21A0A0C4DH24 114 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 MED24O75448 989 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 SPATA31C1P0DKV0 1188 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 RPA1P27694 616 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 GPC3P51654 580 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 DRP2Q13474 957 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 PPP2R2DQ66LE6 453 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 TMEM40Q8WWA1 233 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 TCP11Q8WWU5 503 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 NACC1Q96RE7 527 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 TTYH1Q9H313 450 aaPredicted RBP17.78■□□□□ 0.44
LIME1-209ENST00000494776 MTMR10Q9NXD2 777 aa17.78■□□□□ 0.44
LIME1-209ENST00000494776 A0A087WWV3 80 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.77■□□□□ 0.44
LIME1-209ENST00000494776 ENPP3O14638 875 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 STX6O43752 255 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 GAS2O43903 313 aaKnown RBP17.77■□□□□ 0.44
LIME1-209ENST00000494776 GJB5O95377 273 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 CA3P07451 260 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.44
LIME1-209ENST00000494776 EIF4BP23588 611 aaKnown RBP17.77■□□□□ 0.44
LIME1-209ENST00000494776 ATP2C1P98194 919 aaPredicted RBP17.77■□□□□ 0.44
LIME1-209ENST00000494776 MKRN4PQ13434 485 aaPredicted RBP17.77■□□□□ 0.44
LIME1-209ENST00000494776 EMC2Q15006 297 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 KRT79Q5XKE5 535 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 SPRYD3Q8NCJ5 442 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 SNX29Q8TEQ0 813 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 PSPC1Q8WXF1 523 aaKnown RBP17.77■□□□□ 0.44
LIME1-209ENST00000494776 TMEM143Q96AN5 459 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 RAD9AQ99638 391 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 MTRQ99707 1265 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.44
LIME1-209ENST00000494776 ADAMTS10Q9H324 1103 aa17.77■□□□□ 0.44
LIME1-209ENST00000494776 DHX33Q9H6R0 707 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms