RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 KLHL5Q96PQ7 755 aa12.72□□□□□ -0.37
TRIM59-206ENST00000494486 NELL2Q99435 816 aa12.72□□□□□ -0.37
TRIM59-206ENST00000494486 FAM49AQ9H0Q0 323 aaPredicted RBP12.72□□□□□ -0.37
TRIM59-206ENST00000494486 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
TRIM59-206ENST00000494486 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
TRIM59-206ENST00000494486 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
TRIM59-206ENST00000494486 DENND4AQ7Z401 1863 aa12.72□□□□□ -0.37
TRIM59-206ENST00000494486 KDM3AQ9Y4C1 1321 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 SPEGQ15772 3267 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 RRN3P2A6NIE6 340 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 ANHXE9PGG2 379 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 MGEA5O60502 916 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 CFBP00751 764 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 CCND2P30279 289 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.37
TRIM59-206ENST00000494486 HSD17B4P51659 736 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 POLGP54098 1239 aaPredicted RBP12.71□□□□□ -0.37
TRIM59-206ENST00000494486 SNW1Q13573 536 aaKnown RBP12.71□□□□□ -0.37
TRIM59-206ENST00000494486 PGM5Q15124 567 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 AASDHQ4L235 1098 aaPredicted RBP12.71□□□□□ -0.37
TRIM59-206ENST00000494486 GPATCH4Q5T3I0 446 aaKnown RBP12.71□□□□□ -0.37
TRIM59-206ENST00000494486 VPS52Q8N1B4 723 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 BBXQ8WY36 941 aaPredicted RBP12.71□□□□□ -0.37
TRIM59-206ENST00000494486 GATA6Q92908 595 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 MYADMQ96S97 322 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 LSM14BQ9BX40 385 aaKnown RBP12.71□□□□□ -0.37
TRIM59-206ENST00000494486 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 ZBP1Q9H171 429 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 WASF3Q9UPY6 502 aa12.71□□□□□ -0.37
TRIM59-206ENST00000494486 GCN1Q92616 2671 aaKnown RBP12.71□□□□□ -0.38
TRIM59-206ENST00000494486 RANBP6O60518 1105 aaKnown RBP12.7□□□□□ -0.38
TRIM59-206ENST00000494486 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 CTSAP10619 480 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 GPC5P78333 572 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 GHRHRQ02643 423 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 PPP2R5DQ14738 602 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 MLF2Q15773 248 aaPredicted RBP12.7□□□□□ -0.38
TRIM59-206ENST00000494486 CDC37Q16543 378 aaPredicted RBP12.7□□□□□ -0.38
TRIM59-206ENST00000494486 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 SLC44A4Q53GD3 710 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 FAM9BQ8IZU0 186 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 NME8Q8N427 588 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 TMEM57Q8N5G2 664 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 SAMD3Q8N6K7 520 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 TMEM169Q96HH4 297 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 NAPBQ9H115 298 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 LTB4R2Q9NPC1 389 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM59-206ENST00000494486 TNNQ9UQP3 1299 aa12.7□□□□□ -0.38
TRIM59-206ENST00000494486 CLUHO75153 1309 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 SPATA31C2B4DYI2 1134 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 LAMP2P13473 410 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 ALDH7A1P49419 539 aaKnown RBP12.69□□□□□ -0.38
TRIM59-206ENST00000494486 KRT76Q01546 638 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 HTR4Q13639 388 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 SIM2Q14190 667 aaPredicted RBP12.69□□□□□ -0.38
TRIM59-206ENST00000494486 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
TRIM59-206ENST00000494486 ABI1Q8IZP0 508 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 PCDHA1Q9Y5I3 950 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 MAST4O15021 2626 aa12.69□□□□□ -0.38
TRIM59-206ENST00000494486 FNDC1Q4ZHG4 1894 aaPredicted RBP12.68□□□□□ -0.38
TRIM59-206ENST00000494486 EIF4E1BA6NMX2 242 aaKnown RBP12.68□□□□□ -0.38
TRIM59-206ENST00000494486 CYSRT1A8MQ03 144 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 GPR182O15218 404 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 RPS6KA5O75582 802 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 TDGF1P13385 188 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 CLCN4P51793 760 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 FOXC1Q12948 553 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 STPG1Q5TH74 334 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 PSAPL1Q6NUJ1 521 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 C12orf50Q8NA57 414 aaPredicted RBP12.68□□□□□ -0.38
TRIM59-206ENST00000494486 IL31RAQ8NI17 732 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 EMILIN2Q9BXX0 1053 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 TCP11L1Q9NUJ3 509 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 PCDHA2Q9Y5H9 948 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 NUMBLQ9Y6R0 609 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 ZZEF1O43149 2961 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 CEP295Q9C0D2 2601 aa12.68□□□□□ -0.38
TRIM59-206ENST00000494486 FRYQ5TBA9 3013 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 CARNS1A5YM72 827 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 RNF113AO15541 343 aaKnown RBP12.67□□□□□ -0.38
TRIM59-206ENST00000494486 STAM2O75886 525 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 ZFYP08048 801 aaPredicted RBP12.67□□□□□ -0.38
TRIM59-206ENST00000494486 KLRC2P26717 231 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 CNR2P34972 360 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 IGBP1P78318 339 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 PFKPQ01813 784 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 WTAPQ15007 396 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 ELMSAN1Q6PJG2 1045 aa12.67□□□□□ -0.38
TRIM59-206ENST00000494486 DDX53Q86TM3 631 aaKnown RBP12.67□□□□□ -0.38
TRIM59-206ENST00000494486 PDZD3Q86UT5 571 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms