RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 SCFD1Q8WVM8 642 aa22.79■■□□□ 1.24
KPNA1-210ENST00000494339 NIFKQ9BYG3 293 aaKnown RBP22.79■■□□□ 1.24
KPNA1-210ENST00000494339 SEMA6BQ9H3T3 888 aa22.79■■□□□ 1.24
KPNA1-210ENST00000494339 GPR25O00155 361 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 GCNT3O95395 438 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 LGALS2P05162 132 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 NMT1P30419 496 aaKnown RBP22.78■■□□□ 1.24
KPNA1-210ENST00000494339 ZNF75DP51815 510 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 SOX10P56693 466 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 ANKRD40Q6AI12 368 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 TTI2Q6NXR4 508 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 NELFCDQ8IXH7 590 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 FAM178BQ8IXR5 827 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 FAM167AQ96KS9 214 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 TIPINQ9BVW5 301 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 SEL1LQ9UBV2 794 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 GNEQ9Y223 722 aaKnown RBP22.78■■□□□ 1.24
KPNA1-210ENST00000494339 CASP8AP2Q9UKL3 1982 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 BICDL2A1A5D9 508 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 DYNC1LI2O43237 492 aaPredicted RBP22.78■■□□□ 1.24
KPNA1-210ENST00000494339 PTMAP06454 111 aaKnown RBP22.78■■□□□ 1.24
KPNA1-210ENST00000494339 ZNF286BP0CG31 522 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 POLGP54098 1239 aaPredicted RBP22.78■■□□□ 1.24
KPNA1-210ENST00000494339 PLCB4Q15147 1175 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 CENPPQ6IPU0 288 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 BBXQ8WY36 941 aaPredicted RBP22.78■■□□□ 1.24
KPNA1-210ENST00000494339 DRC1Q96MC2 740 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 ATP6V0A4Q9HBG4 840 aa22.78■■□□□ 1.24
KPNA1-210ENST00000494339 MMP3P08254 477 aa22.77■■□□□ 1.24
KPNA1-210ENST00000494339 ZNF18P17022 549 aa22.77■■□□□ 1.24
KPNA1-210ENST00000494339 MFSD14CQ5VZR4 134 aa22.77■■□□□ 1.24
KPNA1-210ENST00000494339 TLK2Q86UE8 772 aa22.77■■□□□ 1.24
KPNA1-210ENST00000494339 ATP8B4Q8TF62 1192 aa22.77■■□□□ 1.24
KPNA1-210ENST00000494339 FIZ1Q96SL8 496 aa22.77■■□□□ 1.24
KPNA1-210ENST00000494339 XPNPEP1Q9NQW7 623 aa22.77■■□□□ 1.24
KPNA1-210ENST00000494339 LARSQ9P2J5 1176 aaKnown RBP22.77■■□□□ 1.24
KPNA1-210ENST00000494339 PPFIA4O75335 1185 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 PRPF6O94906 941 aaKnown RBP22.76■■□□□ 1.23
KPNA1-210ENST00000494339 CDK11BP21127 795 aaKnown RBP22.76■■□□□ 1.23
KPNA1-210ENST00000494339 CDC25BP30305 580 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 SLC26A2P50443 739 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 EMC2Q15006 297 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 EPM2AIP1Q7L775 607 aaPredicted RBP22.76■■□□□ 1.23
KPNA1-210ENST00000494339 MCPH1Q8NEM0 835 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 TRPV1Q8NER1 839 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 EEF2KMTQ96G04 330 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 MRFAP1L1Q96HT8 127 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 PDLIM7Q9NR12 457 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 ERAP1Q9NZ08 941 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 FAM184BQ9ULE4 1060 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 TRPC6Q9Y210 931 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 PLS3P13797 630 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 TARBP2Q15633 366 aaKnown RBP22.76■■□□□ 1.23
KPNA1-210ENST00000494339 ZC2HC1CQ53FD0 456 aaPredicted RBP22.76■■□□□ 1.23
KPNA1-210ENST00000494339 CEP89Q96ST8 783 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 DUSP9Q99956 384 aaKnown RBP22.76■■□□□ 1.23
KPNA1-210ENST00000494339 CENPFP49454 3210 aa22.76■■□□□ 1.23
KPNA1-210ENST00000494339 GOLGA6L6A8MZA4 724 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 KIF20AO95235 890 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 PEX3P56589 373 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 FANCCQ00597 558 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 TRIM32Q13049 653 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 ZNF720Q7Z2F6 126 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 CSGALNACT2Q8N6G5 542 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 SLC7A3Q8WY07 619 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 C16orf70Q9BSU1 422 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 SRRTQ9BXP5 876 aaKnown RBP22.75■■□□□ 1.23
KPNA1-210ENST00000494339 RNPEPQ9H4A4 650 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 DHX33Q9H6R0 707 aaKnown RBP22.75■■□□□ 1.23
KPNA1-210ENST00000494339 SRRDQ9UH36 339 aa22.75■■□□□ 1.23
KPNA1-210ENST00000494339 ELNP15502 786 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 IRX5P78411 483 aaPredicted RBP22.74■■□□□ 1.23
KPNA1-210ENST00000494339 DGKDQ16760 1214 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 CDKAL1Q5VV42 579 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 KIFAP3Q92845 792 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 K7ENM7 598 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 SERPINC1P01008 464 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 CYBAP13498 195 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 AKR1A1P14550 325 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 HOXD10P28358 340 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 HOXD13P35453 343 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 KCNA1Q09470 495 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 CREBRFQ8IUR6 639 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 KSR1Q8IVT5 923 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 TMEM143Q96AN5 459 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 IFNKQ9P0W0 207 aa22.74■■□□□ 1.23
KPNA1-210ENST00000494339 ZBTB42B2RXF5 422 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 HOXD8P13378 290 aaPredicted RBP22.73■■□□□ 1.23
KPNA1-210ENST00000494339 LRRC63Q05C16 580 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 ZNF507Q8TCN5 953 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 ZNF296Q8WUU4 475 aaPredicted RBP22.73■■□□□ 1.23
KPNA1-210ENST00000494339 BSNDQ8WZ55 320 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 TSG101Q99816 390 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 POLR3FQ9H1D9 316 aaPredicted RBP22.73■■□□□ 1.23
KPNA1-210ENST00000494339 KCTD10Q9H3F6 313 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 SAGE1Q9NXZ1 904 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 TSKSQ9UJT2 592 aa22.73■■□□□ 1.23
KPNA1-210ENST00000494339 A6NJR5 290 aa22.72■■□□□ 1.23
KPNA1-210ENST00000494339 H3BRB1 525 aa22.72■■□□□ 1.23
KPNA1-210ENST00000494339 EIF3DO15371 548 aaKnown RBP eCLIP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms