RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ARHGEF35A5YM69 484 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 SLC26A4O43511 780 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 GAS2O43903 313 aaKnown RBP13.91□□□□□ -0.18
TRA2A-209ENST00000494255 MAFO75444 373 aaPredicted RBP13.91□□□□□ -0.18
TRA2A-209ENST00000494255 ACRP10323 421 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 NCLP19338 710 aaKnown RBP13.91□□□□□ -0.18
TRA2A-209ENST00000494255 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
TRA2A-209ENST00000494255 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 CABP7Q86V35 215 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 ZNF710Q8N1W2 664 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
TRA2A-209ENST00000494255 RASSF8Q8NHQ8 419 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 CALML4Q96GE6 196 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 CEP89Q96ST8 783 aa13.91□□□□□ -0.18
TRA2A-209ENST00000494255 MMTAG2Q9BU76 263 aaKnown RBP13.91□□□□□ -0.18
TRA2A-209ENST00000494255 FBXO2Q9UK22 296 aaPredicted RBP13.91□□□□□ -0.18
TRA2A-209ENST00000494255 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 A0A087WWV3 80 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 DGAT1O75907 488 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 FGBP02675 491 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 CHRNA1P02708 482 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 VTNP04004 478 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 ACTN1P12814 892 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 TXLNAP40222 546 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 RARRES1P49788 294 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 EPHB4P54760 987 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 EMC2Q15006 297 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 ECM1Q16610 540 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 LINC01465Q8N7H1 131 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 KCNG4Q8TDN1 519 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 SCLT1Q96NL6 688 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 MTRQ99707 1265 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 CELF4Q9BZC1 486 aaKnown RBP13.9□□□□□ -0.18
TRA2A-209ENST00000494255 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 MTIF3Q9H2K0 278 aaKnown RBP13.9□□□□□ -0.18
TRA2A-209ENST00000494255 DHX33Q9H6R0 707 aaKnown RBP13.9□□□□□ -0.18
TRA2A-209ENST00000494255 ATP6V0A4Q9HBG4 840 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 COLQQ9Y215 455 aaPredicted RBP13.9□□□□□ -0.18
TRA2A-209ENST00000494255 CEP290O15078 2479 aa13.9□□□□□ -0.18
TRA2A-209ENST00000494255 USO1O60763 962 aaKnown RBP13.89□□□□□ -0.19
TRA2A-209ENST00000494255 NBNO60934 754 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 PPP6R2O75170 966 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 KRT85P78386 507 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 CDC42EP1Q00587 391 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 GRIN1Q05586 938 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 MGAT3Q09327 533 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 HYIQ5T013 277 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 TDHQ8IZJ6 230 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 KCTD17Q8N5Z5 321 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 TCP11Q8WWU5 503 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.192e-9■■■□□ 15
TRA2A-209ENST00000494255 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
TRA2A-209ENST00000494255 SUCLA2Q9P2R7 463 aaPredicted RBP13.89□□□□□ -0.19
TRA2A-209ENST00000494255 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
TRA2A-209ENST00000494255 A0A1W2PPC1 479 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 EYA4O95677 639 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 CXCL10P02778 98 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 GHRP10912 638 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 DDIT3P35638 169 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 NLRP11P59045 1033 aaKnown RBP13.88□□□□□ -0.19
TRA2A-209ENST00000494255 MBTPS1Q14703 1052 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 TMEM240Q5SV17 173 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 CNKSR3Q6P9H4 555 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 PSPC1Q8WXF1 523 aaKnown RBP13.88□□□□□ -0.19
TRA2A-209ENST00000494255 SEPT8Q92599 483 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
TRA2A-209ENST00000494255 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 PRO3102Q9H379 93 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
TRA2A-209ENST00000494255 E9PMD0 336 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 GRB10Q13322 594 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 GPNMBQ14956 572 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 SHHQ15465 462 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 KIZQ2M2Z5 673 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 USP38Q8NB14 1042 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 MCPH1Q8NEM0 835 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 SYMPKQ92797 1274 aaKnown RBP13.88□□□□□ -0.19
TRA2A-209ENST00000494255 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 PLIN2Q99541 437 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 CCSER1Q9C0I3 900 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 BHMT2Q9H2M3 363 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 CCDC39Q9UFE4 941 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 SQORQ9Y6N5 450 aa13.88□□□□□ -0.19
TRA2A-209ENST00000494255 SIP14410 1827 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 CUTAO60888 179 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 GPR32O75388 356 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 ME1P48163 572 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 CRYBB1P53674 252 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-209ENST00000494255 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-209ENST00000494255 DRP2Q13474 957 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms