RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 REREQ9P2R6 1566 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 EPHB1P54762 984 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 GDAP1Q8TB36 358 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 LMCD1Q9NZU5 365 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 PPFIA2O75334 1257 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 KCNH2Q12809 1159 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 TXNRD1Q16881 649 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 MIGA2Q7L4E1 593 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 PDCD7Q8N8D1 485 aaKnown RBP20.53■□□□□ 0.88
COL27A1-207ENST00000494090 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 CPDO75976 1380 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 GRID2IPA4D2P6 1211 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 TEX33O43247 280 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 NMT2O60551 498 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 ZBED1O96006 694 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 KRT76Q01546 638 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 GFPT1Q06210 699 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-207ENST00000494090 MYLK4Q86YV6 388 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-207ENST00000494090 PDIK1LQ8N165 341 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 UTYO14607 1347 aa20.53■□□□□ 0.88
COL27A1-207ENST00000494090 CD58P19256 250 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PRELPP51888 382 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PEX3P56589 373 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 ATP2C1P98194 919 aaPredicted RBP20.52■□□□□ 0.88
COL27A1-207ENST00000494090 USP31Q70CQ4 1352 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 FDX1P10109 184 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 CRKP46108 304 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 E2F5Q15329 346 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 FAM83BQ5T0W9 1011 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 THEM5Q8N1Q8 247 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PIGOQ8TEQ8 1089 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 FBXO41Q8TF61 875 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 GH2P01242 217 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 RASIP1Q5U651 963 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PCGF5Q86SE9 256 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PPP1R9AQ9ULJ8 1098 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 IQANK1A0A1B0GTG1 560 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 E9PMD0 336 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 SNAP25P60880 206 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 GPC5P78333 572 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 TMTC4Q5T4D3 741 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 EEPD1Q7L9B9 569 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 GUF1Q8N442 669 aaKnown RBP20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PDZD8Q8NEN9 1154 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 PYROXD1Q8WU10 500 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 DDX27Q96GQ7 796 aaKnown RBP20.52■□□□□ 0.88
COL27A1-207ENST00000494090 OSBPL9Q96SU4 736 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 MRFAP1Q9Y605 127 aa20.52■□□□□ 0.88
COL27A1-207ENST00000494090 TTC26A0AVF1 554 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 ABCB11O95342 1321 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 SRGAP2CP0DJJ0 459 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 PLS3P13797 630 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 ARPP19P56211 112 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 BBS9Q3SYG4 887 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 RABL6Q3YEC7 729 aaPredicted RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 C2orf69Q8N8R5 385 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 CHMP6Q96FZ7 201 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 SETBP1Q9Y6X0 1596 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 TJP3O95049 919 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 PHKA2P46019 1235 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 VPS39Q96JC1 886 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 NLRP4Q96MN2 994 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 GPR101Q96P66 508 aaPredicted RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 ORC4O43929 436 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 GGCXP38435 758 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 KNOP1Q1ED39 458 aaKnown RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 HSP90AA5PQ58FG0 334 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 KLC3Q6P597 504 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 STOX1Q6ZVD7 989 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 SYNE4Q8N205 404 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 THEGQ9P2T0 379 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 ORC6Q9Y5N6 252 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 RPSAP08865 295 aaKnown RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 CA4P22748 312 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 GYS2P54840 703 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 XXYLT1Q8NBI6 393 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 ZC3H15Q8WU90 426 aaKnown RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 SNAP23O00161 211 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 ACSL3O95573 720 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 COPB2P35606 906 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 MRPS25P82663 173 aaKnown RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 KRT39Q6A163 491 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 HIBCHQ6NVY1 386 aaPredicted RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 TTC39CQ8N584 583 aa20.51■□□□□ 0.87
COL27A1-207ENST00000494090 ABT1Q9ULW3 272 aaKnown RBP20.51■□□□□ 0.87
COL27A1-207ENST00000494090 CHEK2O96017 543 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 MTMR1Q13613 665 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 SNX24Q9Y343 169 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 TULP4Q9NRJ4 1543 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 SFNP31947 248 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 TTC13Q8NBP0 860 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 MAPK13O15264 365 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 OSTNP61366 133 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 PDCLQ13371 301 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 MAPK6Q16659 721 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 SPDYE1Q8NFV5 336 aaPredicted RBP20.5■□□□□ 0.87
COL27A1-207ENST00000494090 CCDC124Q96CT7 223 aaKnown RBP20.5■□□□□ 0.87
COL27A1-207ENST00000494090 DRC3Q9H069 523 aa20.5■□□□□ 0.87
COL27A1-207ENST00000494090 CNOT8Q9UFF9 292 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms