RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 C5orf67F2Z3F1 127 aa11□□□□□ -0.65
UFD1-210ENST00000494054 MAGEB2O15479 319 aa11□□□□□ -0.65
UFD1-210ENST00000494054 RB1P06400 928 aa11□□□□□ -0.65
UFD1-210ENST00000494054 NLRP11P59045 1033 aaKnown RBP11□□□□□ -0.65
UFD1-210ENST00000494054 ANKRD1Q15327 319 aa11□□□□□ -0.65
UFD1-210ENST00000494054 TARBP2Q15633 366 aaKnown RBP11□□□□□ -0.65
UFD1-210ENST00000494054 PTPROQ16827 1216 aa11□□□□□ -0.65
UFD1-210ENST00000494054 LETM2Q2VYF4 491 aa11□□□□□ -0.65
UFD1-210ENST00000494054 PAN2Q504Q3 1202 aaKnown RBP11□□□□□ -0.65
UFD1-210ENST00000494054 BANK1Q8NDB2 785 aa11□□□□□ -0.65
UFD1-210ENST00000494054 IL27Q8NEV9 243 aa11□□□□□ -0.65
UFD1-210ENST00000494054 ZNF668Q96K58 619 aaPredicted RBP11□□□□□ -0.65
UFD1-210ENST00000494054 CEP89Q96ST8 783 aa11□□□□□ -0.65
UFD1-210ENST00000494054 ADAM2Q99965 735 aa11□□□□□ -0.65
UFD1-210ENST00000494054 SH2D3AQ9BRG2 576 aa11□□□□□ -0.65
UFD1-210ENST00000494054 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
UFD1-210ENST00000494054 UBE2ZQ9H832 354 aaPredicted RBP11□□□□□ -0.65
UFD1-210ENST00000494054 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
UFD1-210ENST00000494054 RGS18Q9NS28 235 aa11□□□□□ -0.65
UFD1-210ENST00000494054 ORC3Q9UBD5 711 aaPredicted RBP11□□□□□ -0.65
UFD1-210ENST00000494054 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
UFD1-210ENST00000494054 NCOR1O75376 2440 aa11□□□□□ -0.65
UFD1-210ENST00000494054 REV3LO60673 3130 aa11□□□□□ -0.65
UFD1-210ENST00000494054 NLRC5Q86WI3 1866 aa11□□□□□ -0.65
UFD1-210ENST00000494054 WDR81Q562E7 1941 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 BDP1A6H8Y1 2624 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 MYO7AQ13402 2215 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 CCDC194A0A1B0GVG4 234 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 C9IYK1 514 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 EML1O00423 815 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 GPR182O15218 404 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 SARSP49591 514 aaKnown RBP10.99□□□□□ -0.65
UFD1-210ENST00000494054 DRP2Q13474 957 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 CAMK1Q14012 370 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 DSC3Q14574 896 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 TCEAL5Q5H9L2 206 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 FAM102BQ5T8I3 360 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 PIK3AP1Q6ZUJ8 805 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 CMTR2Q8IYT2 770 aaKnown RBP10.99□□□□□ -0.65
UFD1-210ENST00000494054 RDM1Q8NG50 284 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 GTF3C6Q969F1 213 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 NIFKQ9BYG3 293 aaKnown RBP10.99□□□□□ -0.65
UFD1-210ENST00000494054 ALG13Q9NP73 1137 aaKnown RBP10.99□□□□□ -0.65
UFD1-210ENST00000494054 VAV3Q9UKW4 847 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 AKT3Q9Y243 479 aa10.99□□□□□ -0.65
UFD1-210ENST00000494054 RALGAPA2Q2PPJ7 1873 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 DENND3A2RUS2 1198 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 CCNT1O60563 726 aaKnown RBP10.98□□□□□ -0.65
UFD1-210ENST00000494054 JAK2O60674 1132 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 XBP1P17861 261 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 KCNA5P22460 613 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 DNAJB1P25685 340 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 GPC3P51654 580 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 NEK4P51957 841 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 FAM189BP81408 668 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 ST3GAL1Q11201 340 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 NR5A1Q13285 461 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 MTERF2Q49AM1 385 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 TIGD5Q53EQ6 642 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 XKR3Q5GH77 459 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 PPP4R3AQ6IN85 833 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 SLC24A5Q71RS6 500 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 ANO5Q75V66 913 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 NEK8Q86SG6 692 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 NSUN7Q8NE18 718 aaKnown RBP10.98□□□□□ -0.65
UFD1-210ENST00000494054 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.98□□□□□ -0.65
UFD1-210ENST00000494054 HAS1Q92839 578 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 TNFRSF25Q93038 417 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 MAP7D2Q96T17 732 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 C11orf84Q9BUA3 381 aaPredicted RBP10.98□□□□□ -0.65
UFD1-210ENST00000494054 NSUN3Q9H649 340 aaKnown RBP10.98□□□□□ -0.65
UFD1-210ENST00000494054 C1orf112Q9NSG2 853 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 SEPT9Q9UHD8 586 aaPredicted RBP10.98□□□□□ -0.65
UFD1-210ENST00000494054 LRFN2Q9ULH4 789 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 PCDHB7Q9Y5E2 793 aa10.98□□□□□ -0.65
UFD1-210ENST00000494054 IGKV6-21A0A0C4DH24 114 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 DDX11L8A8MPP1 907 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 CSDE1O75534 798 aaKnown RBP10.97□□□□□ -0.65
UFD1-210ENST00000494054 CSPG5O95196 566 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 ITGB1P05556 798 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 FGFR4P22455 802 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 EIF4BP23588 611 aaKnown RBP10.97□□□□□ -0.65
UFD1-210ENST00000494054 TMOD1P28289 359 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 PPP2R5CQ13362 524 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 COL19A1Q14993 1142 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 LEXMQ3ZCV2 418 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 FAM43BQ6ZT52 329 aaPredicted RBP10.97□□□□□ -0.65
UFD1-210ENST00000494054 POTEDQ86YR6 584 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 ZNF579Q8NAF0 562 aaKnown RBP10.97□□□□□ -0.65
UFD1-210ENST00000494054 KLHL23Q8NBE8 558 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 SPPL3Q8TCT6 385 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 WASF1Q92558 559 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 PLVAPQ9BX97 442 aa10.97□□□□□ -0.65
UFD1-210ENST00000494054 LMAN2LQ9H0V9 348 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms