RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 C10orf88Q9H8K7 445 aa8.39□□□□□ -1.07
BRCA1-221ENST00000493795 NEMP1O14524 444 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 NDUFA8P51970 172 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 BEND6Q5SZJ8 279 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF658Q5TYW1 1059 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CDR2LQ86X02 465 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 ERICH1Q86X53 443 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 RHOT2Q8IXI1 618 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 OLFML3Q9NRN5 406 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 DCDC2Q9UHG0 476 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PCDHA7Q9UN72 937 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CCDC188H7C350 402 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PPIP5K2O43314 1243 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CCND2P30279 289 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CYTH1Q15438 398 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 DSTYKQ6XUX3 929 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 FAM47EQ6ZV65 393 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 APPL2Q8NEU8 664 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 WDR48Q8TAF3 677 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 COG1Q8WTW3 980 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PLEKHA8Q96JA3 519 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 NLRP4Q96MN2 994 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 SARS2Q9NP81 518 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CYP26B1Q9NR63 512 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 TARSL2A2RTX5 802 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CD58P19256 250 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 POU5F1BQ06416 359 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PTGDRQ13258 359 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PKN3Q6P5Z2 889 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CHMP1BQ7LBR1 199 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 LRRC59Q96AG4 307 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CLIC6Q96NY7 704 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 WDR11Q9BZH6 1224 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PCIF1Q9H4Z3 704 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 AURKCQ9UQB9 309 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 DISP3Q9P2K9 1392 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 MED23Q9ULK4 1368 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PIK3R2O00459 728 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 FAM107AO95990 144 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 EIF2S1P05198 315 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 OSBPP22059 807 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 EIF4A3P38919 411 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 SERPINB4P48594 390 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CDO1Q16878 200 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 TBC1D9BQ66K14 1250 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 SLFN13Q68D06 897 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 APOA5Q6Q788 366 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 BBS7Q8IWZ6 715 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CMTR1Q8N1G2 835 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 THEM5Q8N1Q8 247 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 THAP9Q9H5L6 903 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 RPF1Q9H9Y2 349 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 RGL1Q9NZL6 768 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 FAM32AQ9Y421 112 aaKnown RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 IKBKBO14920 756 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 SEC24BO95487 1268 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 MYL1P05976 194 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 KRT16P08779 473 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PMS2P54278 862 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CUL3Q13618 768 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 GCKRQ14397 625 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 TRIP4Q15650 581 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CEP95Q96GE4 821 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-221ENST00000493795 PYCARDQ9ULZ3 195 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 NFU1Q9UMS0 254 aa8.38□□□□□ -1.07
BRCA1-221ENST00000493795 NNMTP40261 264 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 SLC7A5Q01650 507 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PDCLQ13371 301 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 TP53BP2Q13625 1128 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ALCAMQ13740 583 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 TFDP2Q14188 446 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 LRRC31Q6UY01 552 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 TSPYL6Q8N831 410 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PARVGQ9HBI0 331 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CYP4F11Q9HBI6 524 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 NSMCE4AQ9NXX6 385 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CLCA2Q9UQC9 943 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 A0A1W2PQ27 194 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 A0A1W2PQ64 194 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 A0A1W2PQD8 194 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 GOLGA8TH3BQL2 631 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 STK25O00506 426 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ASAP2O43150 1006 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PPP6R2O75170 966 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 GOLGA8HP0CJ92 632 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 MXI1P50539 228 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CENPPQ6IPU0 288 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 FGD2Q7Z6J4 655 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF467Q7Z7K2 595 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 FBXO18Q8NFZ0 1043 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ASZ1Q8WWH4 475 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms