RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 SLFN13Q68D06 897 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 JADE2Q9NQC1 790 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 POLKQ9UBT6 870 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 DIS3Q9Y2L1 958 aaKnown RBP5.86□□□□□ -1.47
CLIP4-212ENST00000493551 SIT1Q9Y3P8 196 aa5.86□□□□□ -1.47
CLIP4-212ENST00000493551 AFDNP55196 1824 aaKnown RBP5.85□□□□□ -1.47
CLIP4-212ENST00000493551 NCAPD2Q15021 1401 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 RNF123Q5XPI4 1314 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 WASHC2AQ641Q2 1341 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 NTRK1P04629 796 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF28P17035 718 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 PIP4K2AP48426 406 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-212ENST00000493551 CNGB1Q14028 1251 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-212ENST00000493551 PRAMEF18Q5VWM3 479 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 TBC1D9BQ66K14 1250 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 CYP4F22Q6NT55 531 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 PKN3Q6P5Z2 889 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 STK32CQ86UX6 486 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 FAM26EQ8N5C1 309 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 TAB3Q8N5C8 712 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-212ENST00000493551 MBD6Q96DN6 1003 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 AP5M1Q9H0R1 490 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 TAOK3Q9H2K8 898 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 TAF1DQ9H5J8 278 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF277Q9NRM2 450 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF451Q9Y4E5 1061 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 CACNA1SQ13698 1873 aa5.85□□□□□ -1.47
CLIP4-212ENST00000493551 COL11A2P13942 1736 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-212ENST00000493551 NPIPB8E9PQR5 432 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 TRAF5O00463 557 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 ZNF623O75123 536 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 HSP90AB1P08238 724 aaKnown RBP5.84□□□□□ -1.47
CLIP4-212ENST00000493551 CYP19A1P11511 503 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-212ENST00000493551 DEFB115Q30KQ5 88 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 SULT6B1Q6IMI4 303 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 CHFRQ96EP1 664 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 PUS7Q96PZ0 661 aaKnown RBP5.84□□□□□ -1.47
CLIP4-212ENST00000493551 NARFQ9UHQ1 456 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 ANKRD26Q9UPS8 1709 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 ADAMTS7Q9UKP4 1686 aa5.84□□□□□ -1.47
CLIP4-212ENST00000493551 KIF24Q5T7B8 1368 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 PASKQ96RG2 1323 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 TRBV23OR9-2A0A075B6M9 112 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 TP53P04637 393 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-212ENST00000493551 HMOX1P09601 288 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 EPHX2P34913 555 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 SEPHS1P49903 392 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 SOX10P56693 466 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 PRR5LQ6MZQ0 368 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 CPNE8Q86YQ8 564 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 SLITRK4Q8IW52 837 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 CNTROBQ8N137 903 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 RNF34Q969K3 372 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 YTHDC1Q96MU7 727 aaKnown RBP5.83□□□□□ -1.48
CLIP4-212ENST00000493551 TMEM168Q9H0V1 697 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 ZNF408Q9H9D4 720 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 L2HGDHQ9H9P8 463 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 NGRNQ9NPE2 291 aaKnown RBP5.83□□□□□ -1.48
CLIP4-212ENST00000493551 DLEC1Q9Y238 1755 aa5.83□□□□□ -1.48
CLIP4-212ENST00000493551 PCNTO95613 3336 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 ANKRD31Q8N7Z5 1873 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 IQCA1LA6NCM1 817 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 STXBP3O00186 592 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 TCERG1O14776 1098 aaKnown RBP5.82□□□□□ -1.48
CLIP4-212ENST00000493551 NPHS1O60500 1241 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 PAMP19021 973 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 ABHD18Q0P651 414 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 PPP2R5DQ14738 602 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 TCEAL1Q15170 157 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 KBTBD2Q8IY47 623 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 NKD1Q969G9 470 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 CAPNS2Q96L46 248 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 MCMBPQ9BTE3 642 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 ADAMTS1Q9UHI8 967 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 HACL1Q9UJ83 578 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 BACE2Q9Y5Z0 518 aa5.82□□□□□ -1.48
CLIP4-212ENST00000493551 SLX4Q8IY92 1834 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 NPHP3-ACAD11A0A0J9YXS1 232 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 FUCA1P04066 466 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 IMPDH2P12268 514 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 FOXE3Q13461 319 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 HS1BP3Q53T59 392 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 MIIPQ5JXC2 388 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 FAM126BQ8IXS8 530 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 AMER2Q8N7J2 671 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 CNBD1Q8NA66 436 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 Q8TCH9 128 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 SEC14L1Q92503 715 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 GPR101Q96P66 508 aaPredicted RBP5.81□□□□□ -1.48
CLIP4-212ENST00000493551 TM9SF2Q99805 663 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 SLC52A2Q9HAB3 445 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 FAM86C1Q9NVL1 165 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 ZNRF3Q9ULT6 936 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 ZNF831Q5JPB2 1677 aa5.81□□□□□ -1.48
CLIP4-212ENST00000493551 VIRMAQ69YN4 1812 aaKnown RBP5.81□□□□□ -1.48
CLIP4-212ENST00000493551 NRXN2Q9P2S2 1712 aa5.8□□□□□ -1.48
CLIP4-212ENST00000493551 C7orf72A4D263 438 aa5.8□□□□□ -1.48
CLIP4-212ENST00000493551 C2orf71A6NGG8 1288 aa5.8□□□□□ -1.48
CLIP4-212ENST00000493551 RASSF10A6NK89 507 aa5.8□□□□□ -1.48
CLIP4-212ENST00000493551 SGSM2O43147 1006 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms