RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 CDK5RAP3Q96JB5 506 aa18.8■□□□□ 0.6
RER1-208ENST00000493207 PLIN2Q99541 437 aa18.8■□□□□ 0.6
RER1-208ENST00000493207 DBR1Q9UK59 544 aaKnown RBP18.8■□□□□ 0.6
RER1-208ENST00000493207 AKT3Q9Y243 479 aa18.8■□□□□ 0.6
RER1-208ENST00000493207 PPME1Q9Y570 386 aa18.8■□□□□ 0.6
RER1-208ENST00000493207 CEP290O15078 2479 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 IGKV6-21A0A0C4DH24 114 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 E9PMD0 336 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 RBAK-RBAKDNI3L0D1 243 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 M0QZ92 97 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 CHRNA1P02708 482 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 RPLP2P05387 115 aaKnown RBP18.79■□□□□ 0.6
RER1-208ENST00000493207 RFC5P40937 340 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 MRPS6P82932 125 aaKnown RBP18.79■□□□□ 0.6
RER1-208ENST00000493207 GRB10Q13322 594 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 HYIQ5T013 277 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 CHRDL2Q6WN34 429 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 NME8Q8N427 588 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 KCNG4Q8TDN1 519 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 SYMPKQ92797 1274 aaKnown RBP18.79■□□□□ 0.6
RER1-208ENST00000493207 EPSTI1Q96J88 318 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 PNMA5Q96PV4 448 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 PPP1R16BQ96T49 567 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 GDF15Q99988 308 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 NT5C3AQ9H0P0 336 aa18.79■□□□□ 0.6
RER1-208ENST00000493207 DHX33Q9H6R0 707 aaKnown RBP18.79■□□□□ 0.6
RER1-208ENST00000493207 CIZ1Q9ULV3 898 aaPredicted RBP18.79■□□□□ 0.6
RER1-208ENST00000493207 VTNP04004 478 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 ACRP10323 421 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 RFC2P35250 354 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 DNM2P50570 870 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 EPHB4P54760 987 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 MGAT3Q09327 533 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 MKRN4PQ13434 485 aaPredicted RBP18.78■□□□□ 0.6
RER1-208ENST00000493207 DRP2Q13474 957 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 MBTPS1Q14703 1052 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 EMC2Q15006 297 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 KARSQ15046 597 aaKnown RBP18.78■□□□□ 0.6
RER1-208ENST00000493207 FAM26DQ5JW98 314 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 IER5Q5VY09 327 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 USP49Q70CQ1 688 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 KCNK18Q7Z418 384 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 EXOC8Q8IYI6 725 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 RASSF8Q8NHQ8 419 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 CALML4Q96GE6 196 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 MAP7D2Q96T17 732 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 MTRQ99707 1265 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 JPH2Q9BR39 696 aaPredicted RBP18.78■□□□□ 0.6
RER1-208ENST00000493207 UBE2OQ9C0C9 1292 aaKnown RBP18.78■□□□□ 0.6
RER1-208ENST00000493207 BHMT2Q9H2M3 363 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 IL23AQ9NPF7 189 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 RCOR1Q9UKL0 485 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 DNM3Q9UQ16 869 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 CDY2AQ9Y6F7 541 aa18.78■□□□□ 0.6
RER1-208ENST00000493207 ARHGEF35A5YM69 484 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 SLC26A4O43511 780 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 USO1O60763 962 aaKnown RBP18.77■□□□□ 0.6
RER1-208ENST00000493207 NBNO60934 754 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 PARNO95453 639 aaKnown RBP18.77■□□□□ 0.6
RER1-208ENST00000493207 ME1P48163 572 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 GPNMBQ14956 572 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 TMEM119Q4V9L6 283 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 SPATA32Q96LK8 384 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 CCSER1Q9C0I3 900 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 ATP6V0A4Q9HBG4 840 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 GINS2Q9Y248 185 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 TRPV2Q9Y5S1 764 aa18.77■□□□□ 0.6
RER1-208ENST00000493207 CUTAO60888 179 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 DGAT1O75907 488 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 EYA4O95677 639 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 TXLNAP40222 546 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 KIZQ2M2Z5 673 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 PADI6Q6TGC4 694 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 C16orf59Q7L2K0 433 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 RPUSD2Q8IZ73 545 aaKnown RBP18.76■□□□□ 0.59
RER1-208ENST00000493207 LEO1Q8WVC0 666 aaPredicted RBP18.76■□□□□ 0.59
RER1-208ENST00000493207 TMEM143Q96AN5 459 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 ZNF668Q96K58 619 aaPredicted RBP18.76■□□□□ 0.59
RER1-208ENST00000493207 IPO9Q96P70 1041 aaKnown RBP18.76■□□□□ 0.59
RER1-208ENST00000493207 CELF4Q9BZC1 486 aaKnown RBP18.76■□□□□ 0.59
RER1-208ENST00000493207 OSBPL7Q9BZF2 842 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 XPNPEP1Q9NQW7 623 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 SUCLA2Q9P2R7 463 aaPredicted RBP18.76■□□□□ 0.59
RER1-208ENST00000493207 PCDHA7Q9UN72 937 aa18.76■□□□□ 0.59
RER1-208ENST00000493207 GAS2O43903 313 aaKnown RBP18.75■□□□□ 0.59
RER1-208ENST00000493207 GPR32O75388 356 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 GHRP10912 638 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 PLCG1P19174 1290 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 BMP8BP34820 402 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 NLRP11P59045 1033 aaKnown RBP18.75■□□□□ 0.59
RER1-208ENST00000493207 AXDND1Q5T1B0 1012 aaPredicted RBP18.75■□□□□ 0.59
RER1-208ENST00000493207 RHPN2Q8IUC4 686 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 TET1Q8NFU7 2136 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 CDHR5Q9HBB8 845 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 CHMP5Q9NZZ3 219 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 CCDC39Q9UFE4 941 aa18.75■□□□□ 0.59
RER1-208ENST00000493207 CXCL10P02778 98 aa18.74■□□□□ 0.59
RER1-208ENST00000493207 PFKMP08237 780 aa18.74■□□□□ 0.59
RER1-208ENST00000493207 GPC3P51654 580 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms