RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 C1orf112Q9NSG2 853 aa15.59■□□□□ 0.09
SAMM50-204ENST00000493161 FAM86C1Q9NVL1 165 aa15.59■□□□□ 0.09
SAMM50-204ENST00000493161 USP34Q70CQ2 3546 aa15.59■□□□□ 0.09
SAMM50-204ENST00000493161 IGLV3-22A0A075B6J6 115 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 GPR182O15218 404 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 FOSP01100 380 aaPredicted RBP15.58■□□□□ 0.08
SAMM50-204ENST00000493161 PDGFBP01127 241 aaPredicted RBP15.58■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF76P36508 570 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 TECP42680 631 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 CRYBB1P53674 252 aaPredicted RBP15.58■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF484Q5JVG2 852 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 JAKMIP3Q5VZ66 844 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 FAM160B1Q5W0V3 765 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 ANKRD54Q6NXT1 300 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 PLA2G4DQ86XP0 818 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 CASD1Q96PB1 797 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 ATP6V0A4Q9HBG4 840 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.08
SAMM50-204ENST00000493161 TMEM161AQ9NX61 479 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 COL1A2P08123 1366 aa15.58■□□□□ 0.08
SAMM50-204ENST00000493161 EVPLQ92817 2033 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 PPP1R18Q6NYC8 613 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 TMEM184AQ6ZMB5 413 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 NIPA1Q7RTP0 329 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 METTL13Q8N6R0 699 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 CRYGNQ8WXF5 182 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 MRPS27Q92552 414 aaKnown RBP15.57■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF668Q96K58 619 aaPredicted RBP15.57■□□□□ 0.08
SAMM50-204ENST00000493161 CDCA3Q99618 268 aaPredicted RBP15.57■□□□□ 0.08
SAMM50-204ENST00000493161 TCF25Q9BQ70 676 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 BARHL2Q9NY43 387 aa15.57■□□□□ 0.08
SAMM50-204ENST00000493161 IPO5O00410 1097 aaKnown RBP15.56■□□□□ 0.08
SAMM50-204ENST00000493161 LAG3P18627 525 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 CDC27P30260 824 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 AVPR2P30518 371 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 CLCN3P51790 818 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 EXOSC10Q01780 885 aaKnown RBP15.56■□□□□ 0.08
SAMM50-204ENST00000493161 PLCB3Q01970 1234 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 AP3B2Q13367 1082 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 RTN1Q16799 776 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 PTPN21Q16825 1174 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 MIS18BP1Q6P0N0 1132 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 SYNE3Q6ZMZ3 975 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 CKAP2LQ8IYA6 745 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 ELAC1Q9H777 363 aaKnown RBP15.56■□□□□ 0.08
SAMM50-204ENST00000493161 ANO2Q9NQ90 1003 aa15.56■□□□□ 0.08
SAMM50-204ENST00000493161 RBM28Q9NW13 759 aaKnown RBP15.56■□□□□ 0.08
SAMM50-204ENST00000493161 MAFBQ9Y5Q3 323 aaPredicted RBP15.56■□□□□ 0.08
SAMM50-204ENST00000493161 PKN1Q16512 942 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 ADCK5Q3MIX3 580 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 ODR4Q5SWX8 454 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 PDE12Q6L8Q7 609 aaKnown RBP15.55■□□□□ 0.08
SAMM50-204ENST00000493161 KCNT2Q6UVM3 1135 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 RASGRP4Q8TDF6 673 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF577Q9BSK1 485 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 TMEM117Q9H0C3 514 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 ADAMTS10Q9H324 1103 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 ENTPD7Q9NQZ7 604 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 LZTS1Q9Y250 596 aa15.55■□□□□ 0.08
SAMM50-204ENST00000493161 ZBTB43O43298 467 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 CYP3A4P08684 503 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 FGFR4P22455 802 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 NLRP11P59045 1033 aaKnown RBP15.54■□□□□ 0.08
SAMM50-204ENST00000493161 CLLU1OSQ5K130 101 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 ECHDC2Q86YB7 292 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 RASEFQ8IZ41 740 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 LRRC71Q8N4P6 559 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 LINC01465Q8N7H1 131 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 PRRX2Q99811 253 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 SMOC2Q9H3U7 446 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 TSHZ2Q9NRE2 1034 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 GABBR1Q9UBS5 961 aa15.54■□□□□ 0.08
SAMM50-204ENST00000493161 PUF60Q9UHX1 559 aaKnown RBP15.54■□□□□ 0.08
SAMM50-204ENST00000493161 ZDBF2Q9HCK1 2354 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 KLF18A0A0U1RQI7 1052 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 GOLGA8AA7E2F4 631 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 GOLGA8BA8MQT2 603 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 hCG_1984214I3L0E3 225 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 WEE2P0C1S8 567 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF746Q6NUN9 644 aaPredicted RBP15.53■□□□□ 0.08
SAMM50-204ENST00000493161 EFCAB12Q6NXP0 572 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 KANK3Q6NY19 840 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 TMC7Q7Z402 723 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 SKAP1Q86WV1 359 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF713Q8N859 430 aaPredicted RBP15.53■□□□□ 0.08
SAMM50-204ENST00000493161 RNF169Q8NCN4 708 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 FEZF2Q8TBJ5 459 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF558Q96NG5 402 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 POMKQ9H5K3 350 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
SAMM50-204ENST00000493161 AKT3Q9Y243 479 aa15.53■□□□□ 0.08
SAMM50-204ENST00000493161 FSD2A1L4K1 749 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 C2CD4DB7Z1M9 353 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 NT5C1B-RDH14C9J2C7 533 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 H0Y858 1186 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 ST18O60284 1047 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 ZNF862O60290 1169 aa15.52■□□□□ 0.08
SAMM50-204ENST00000493161 CSDE1O75534 798 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms