RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 CDC25AP30304 524 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 RARRES1P49788 294 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 WDR5P61964 334 aaKnown RBP16.98■□□□□ 0.31
SS18L1-204ENST00000491916 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
SS18L1-204ENST00000491916 GRIN1Q05586 938 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 SF3A1Q15459 793 aaKnown RBP16.98■□□□□ 0.31
SS18L1-204ENST00000491916 ARL6IP4Q66PJ3 421 aaKnown RBP16.98■□□□□ 0.31
SS18L1-204ENST00000491916 POTEGQ6S5H5 508 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 PIGOQ8TEQ8 1089 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 SUGCTQ9HAC7 445 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 XPNPEP1Q9NQW7 623 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 ANKEF1Q9NU02 776 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 LRWD1Q9UFC0 647 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 PPME1Q9Y570 386 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 GBF1Q92538 1859 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 ABHD14A-ACY1A0A1B0GW23 586 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 PBX2P40425 430 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 DEFB103AP81534 67 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 KIZQ2M2Z5 673 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 TMEM266Q2M3C6 531 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 DTHD1Q6ZMT9 781 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 TSHZ1Q6ZSZ6 1077 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 RTN4RL1Q86UN2 441 aaPredicted RBP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 LINC01599Q8WXQ3 324 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 PPP1R16BQ96T49 567 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 IFIH1Q9BYX4 1025 aaKnown RBP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 ZSCAN16Q9H4T2 348 aaPredicted RBP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 NOC2LQ9Y3T9 749 aaKnown RBP16.97■□□□□ 0.31
SS18L1-204ENST00000491916 SLC4A7Q9Y6M7 1214 aa16.97■□□□□ 0.31
SS18L1-204ENST00000491916 ACTN1P12814 892 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 MUTP22033 750 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 CD52P31358 61 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 RFC5P40937 340 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 GPC3P51654 580 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 CRYBB1P53674 252 aaPredicted RBP16.96■□□□□ 0.31
SS18L1-204ENST00000491916 NLRP11P59045 1033 aaKnown RBP16.96■□□□□ 0.31
SS18L1-204ENST00000491916 IKBKEQ14164 716 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 XKR9Q5GH70 373 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 OTUD6AQ7L8S5 288 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 TMCO2Q7Z6W1 182 aaPredicted RBP16.96■□□□□ 0.31
SS18L1-204ENST00000491916 SEPT8Q92599 483 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 ZNF668Q96K58 619 aaPredicted RBP16.96■□□□□ 0.31
SS18L1-204ENST00000491916 USP28Q96RU2 1077 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 TMX1Q9H3N1 280 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 ERVK-5Q9HDB9 667 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 DBR1Q9UK59 544 aaKnown RBP16.96■□□□□ 0.31
SS18L1-204ENST00000491916 PADI3Q9ULW8 664 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 ZDHHC9Q9Y397 364 aa16.96■□□□□ 0.31
SS18L1-204ENST00000491916 MYH15Q9Y2K3 1946 aa16.96■□□□□ 0.3
SS18L1-204ENST00000491916 COL6A3P12111 3177 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 VWA3AA6NCI4 1184 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 ZBBXA8MT70 800 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 ZSCAN22P10073 491 aaPredicted RBP16.95■□□□□ 0.3
SS18L1-204ENST00000491916 TMOD1P28289 359 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 HYIQ5T013 277 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 GPR153Q6NV75 609 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 FAM228AQ86W67 206 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 KSR1Q8IVT5 923 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 CRIPAKQ8N1N5 446 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 USP38Q8NB14 1042 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 PHOSPHO2Q8TCD6 241 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 LRRC15Q8TF66 581 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 TMEM143Q96AN5 459 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 PNMA5Q96PV4 448 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 OSMRQ99650 979 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 PBX4Q9BYU1 374 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
SS18L1-204ENST00000491916 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
SS18L1-204ENST00000491916 EYSQ5T1H1 3165 aa16.95■□□□□ 0.3
SS18L1-204ENST00000491916 TRANK1O15050 2925 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 M0QZ92 97 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 ENPP3O14638 875 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 MGEA5O60502 916 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 HSP90AA1P07900 732 aaKnown RBP16.94■□□□□ 0.3
SS18L1-204ENST00000491916 ATP2A2P16615 1042 aaKnown RBP16.94■□□□□ 0.3
SS18L1-204ENST00000491916 CCT6AP40227 531 aaKnown RBP16.94■□□□□ 0.3
SS18L1-204ENST00000491916 RABGGTBP53611 331 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 EMC2Q15006 297 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 ERMNQ8TAM6 284 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 SNX29Q8TEQ0 813 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 APBB2Q92870 758 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 MTIF3Q9H2K0 278 aaKnown RBP16.94■□□□□ 0.3
SS18L1-204ENST00000491916 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
SS18L1-204ENST00000491916 FBXO2Q9UK22 296 aaPredicted RBP16.94■□□□□ 0.3
SS18L1-204ENST00000491916 KIAA1024Q9UPX6 916 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
SS18L1-204ENST00000491916 TTC3P53804 2025 aa16.94■□□□□ 0.3
SS18L1-204ENST00000491916 BMP15O95972 392 aa16.93■□□□□ 0.3
SS18L1-204ENST00000491916 F13A1P00488 732 aa16.93■□□□□ 0.3
SS18L1-204ENST00000491916 MYOGP15173 224 aa16.93■□□□□ 0.3
SS18L1-204ENST00000491916 ARL2P36404 184 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms