RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
SSR4-212ENST00000491833 DDX39AO00148 427 aaKnown RBP16.46■□□□□ 0.23
SSR4-212ENST00000491833 GALR2O43603 387 aaPredicted RBP16.46■□□□□ 0.23
SSR4-212ENST00000491833 PDGFBP01127 241 aaPredicted RBP16.46■□□□□ 0.23
SSR4-212ENST00000491833 LIFRP42702 1097 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 NAPAP54920 295 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 KIZQ2M2Z5 673 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 TPRNQ4KMQ1 711 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 ZNF484Q5JVG2 852 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 WWC2Q6AWC2 1192 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 FAM228AQ86W67 206 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 CCDC60Q8IWA6 550 aaPredicted RBP16.46■□□□□ 0.23
SSR4-212ENST00000491833 TEX2Q8IWB9 1127 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 KREMEN2Q8NCW0 462 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 ZNF558Q96NG5 402 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 ZNF302Q9NR11 478 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 SORCS3Q9UPU3 1222 aa16.46■□□□□ 0.23
SSR4-212ENST00000491833 HIDE1A8MVS5 230 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 CCNE2O96020 404 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 FOSP01100 380 aaPredicted RBP16.45■□□□□ 0.22
SSR4-212ENST00000491833 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
SSR4-212ENST00000491833 PDXDC2PQ6P474 469 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 ABHD15Q6UXT9 468 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 MICU3Q86XE3 530 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 UBALD2Q8IYN6 164 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 ABI1Q8IZP0 508 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 NECTIN4Q96NY8 510 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
SSR4-212ENST00000491833 MYO15AQ9UKN7 3530 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 PROB1E7EW31 1015 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 C22orf31O95567 290 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 ADCY7P51828 1080 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 FAM189BP81408 668 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 FOXK2Q01167 660 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 KRT17Q04695 432 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 AP3B2Q13367 1082 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 CES5AQ6NT32 575 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 KCNT2Q6UVM3 1135 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 TMC7Q7Z402 723 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 POMKQ9H5K3 350 aa16.44■□□□□ 0.22
SSR4-212ENST00000491833 EVPLQ92817 2033 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 CACNA1HO95180 2353 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 C2CD4DB7Z1M9 353 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 hCG_1984214I3L0E3 225 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 MEIS1O00470 390 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 VTNP04004 478 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 ZNF76P36508 570 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 SREBF1P36956 1147 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 PBX3P40426 434 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 ITIH3Q06033 890 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 DSC3Q14574 896 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
SSR4-212ENST00000491833 NIPA1Q7RTP0 329 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 CKAP2LQ8IYA6 745 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 ZNF713Q8N859 430 aaPredicted RBP16.43■□□□□ 0.22
SSR4-212ENST00000491833 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
SSR4-212ENST00000491833 CASD1Q96PB1 797 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 CDH22Q9UJ99 828 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 HCFC2Q9Y5Z7 792 aa16.43■□□□□ 0.22
SSR4-212ENST00000491833 ZBTB42B2RXF5 422 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 GPR32O75388 356 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 BRD1O95696 1058 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 ZSCAN20P17040 1043 aaPredicted RBP16.42■□□□□ 0.22
SSR4-212ENST00000491833 CA8P35219 290 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 TYW1BQ6NUM6 668 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 SWSAP1Q6NVH7 229 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 LRRC55Q6ZSA7 311 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 METTL13Q8N6R0 699 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 RNF19AQ9NV58 838 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
SSR4-212ENST00000491833 SPG21Q9NZD8 308 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 TCEAL9Q9UHQ7 104 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 CEP131Q9UPN4 1083 aa16.42■□□□□ 0.22
SSR4-212ENST00000491833 PRR23AA6NEV1 266 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 NBL1P41271 181 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 MTHFRP42898 656 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 ERICH6BQ5W0A0 696 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 ASCL5Q7RTU5 278 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 SGMS1Q86VZ5 419 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 TMEM105Q8N8V8 129 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 TDRD5Q8NAT2 981 aaKnown RBP16.41■□□□□ 0.22
SSR4-212ENST00000491833 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 GLT8D2Q9H1C3 349 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 AKT3Q9Y243 479 aa16.41■□□□□ 0.22
SSR4-212ENST00000491833 IPO5O00410 1097 aaKnown RBP16.4■□□□□ 0.22
SSR4-212ENST00000491833 SLC27A2O14975 620 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 ATP4AP20648 1035 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 CLK2P49760 499 aaKnown RBP16.4■□□□□ 0.22
SSR4-212ENST00000491833 CLCN3P51790 818 aa16.4■□□□□ 0.22
SSR4-212ENST00000491833 SETQ01105 290 aaPredicted RBP16.4■□□□□ 0.22
SSR4-212ENST00000491833 COL9A3Q14050 684 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms