RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.23■□□□□ 0.35
VPS26A-207ENST00000490696 TPH2Q8IWU9 490 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 USP38Q8NB14 1042 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 SUGCTQ9HAC7 445 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 CDHR5Q9HBB8 845 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 CYP26B1Q9NR63 512 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
VPS26A-207ENST00000490696 MSRAQ9UJ68 235 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 PCDHA11Q9Y5I1 949 aa17.23■□□□□ 0.35
VPS26A-207ENST00000490696 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 GBF1Q92538 1859 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-207ENST00000490696 ZBTB39O15060 712 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 MAFO75444 373 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-207ENST00000490696 PDCP20941 246 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 CD52P31358 61 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 YWHABP31946 246 aaKnown RBP17.22■□□□□ 0.35
VPS26A-207ENST00000490696 PTGDRQ13258 359 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 DRP2Q13474 957 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 KIZQ2M2Z5 673 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 TMCO2Q7Z6W1 182 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-207ENST00000490696 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
VPS26A-207ENST00000490696 TMEM40Q8WWA1 233 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 ADAMTS10Q9H324 1103 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 AKT3Q9Y243 479 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 PPME1Q9Y570 386 aa17.22■□□□□ 0.35
VPS26A-207ENST00000490696 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 SPATA31C1P0DKV0 1188 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
VPS26A-207ENST00000490696 CRYBB1P53674 252 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-207ENST00000490696 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 FAM161BQ96MY7 647 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 NKX2-4Q9H2Z4 354 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 ZNF576Q9H609 170 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 PADI3Q9ULW8 664 aa17.21■□□□□ 0.35
VPS26A-207ENST00000490696 CDH23Q9H251 3354 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 LAD1O00515 517 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 GJB5O95377 273 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 AMHP03971 560 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 SYT1P21579 422 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 NLRP11P59045 1033 aaKnown RBP17.2■□□□□ 0.34
VPS26A-207ENST00000490696 PAK2Q13177 524 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 TMEM266Q2M3C6 531 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 OTUD6AQ7L8S5 288 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 MYOCDQ8IZQ8 938 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 LINC01599Q8WXQ3 324 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 GUCD1Q96NT3 240 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 OSMRQ99650 979 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 JPH2Q9BR39 696 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-207ENST00000490696 POLR3CQ9BUI4 534 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-207ENST00000490696 DHX33Q9H6R0 707 aaKnown RBP17.2■□□□□ 0.34
VPS26A-207ENST00000490696 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 NOC2LQ9Y3T9 749 aaKnown RBP17.2■□□□□ 0.34
VPS26A-207ENST00000490696 MYO9BQ13459 2157 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 A0A0C4DFX4 3053 aa17.2■□□□□ 0.34
VPS26A-207ENST00000490696 VPS37CA5D8V6 355 aaPredicted RBP17.19■□□□□ 0.34
VPS26A-207ENST00000490696 MED24O75448 989 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 CA3P07451 260 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 RFC5P40937 340 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 PRPHP41219 470 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 GPC3P51654 580 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 IL17AQ16552 155 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 XKR9Q5GH70 373 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 CATSPER3Q86XQ3 398 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 TOP1MTQ969P6 601 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 TMX1Q9H3N1 280 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 TUFT1Q9NNX1 390 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 ANKEF1Q9NU02 776 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
VPS26A-207ENST00000490696 ENPP3O14638 875 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 TLL1O43897 1013 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 RPS6KA5O75582 802 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 ARHGEF15O94989 841 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 EIF4BP23588 611 aaKnown RBP17.18■□□□□ 0.34
VPS26A-207ENST00000490696 RPA1P27694 616 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 DNM2P50570 870 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 ATP2C1P98194 919 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-207ENST00000490696 PDIA5Q14554 519 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 GRIN2CQ14957 1233 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 RTN4RL1Q86UN2 441 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-207ENST00000490696 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 FAM228AQ86W67 206 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 IGSF22Q8N9C0 903 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 ERMNQ8TAM6 284 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 SLC7A3Q8WY07 619 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 ZNF668Q96K58 619 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-207ENST00000490696 RAD9AQ99638 391 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 TSPYL2Q9H2G4 693 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-207ENST00000490696 SLC28A3Q9HAS3 691 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 SUCLA2Q9P2R7 463 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms