RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 VHLLQ6RSH7 139 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 CEP128Q6ZU80 1094 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 PPFIBP1Q86W92 1011 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 FIBCD1Q8N539 461 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 TBC1D16Q8TBP0 767 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 LINC01599Q8WXQ3 324 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 MAP6Q96JE9 813 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 FAM84AQ96KN4 292 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 HAUS7Q99871 368 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 COA1Q9GZY4 146 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 USP44Q9H0E7 712 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 MINPP1Q9UNW1 487 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 SUGT1Q9Y2Z0 365 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF451Q9Y4E5 1061 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF804BA4D1E1 1349 aa5.69□□□□□ -1.5
CSTF1-205ENST00000490539 LTBP1Q14766 1721 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 MYH3P11055 1940 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF503-AS2A6NEH8 195 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 WTIPA6NIX2 430 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 SRGAP3O43295 1099 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 ECE2O60344 883 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 HMMRO75330 724 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 DDNO94850 711 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF205O95201 554 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 IFIT1P09914 478 aaKnown RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 RTP1P59025 263 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF445P59923 1031 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 ERVFC1P60507 584 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 CHRNDQ07001 517 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 OS9Q13438 667 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 RABL6Q3YEC7 729 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 LILRA6Q6PI73 481 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 CRTC3Q6UUV7 619 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 CRACR2BQ8N4Y2 399 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 BHLHE22Q8NFJ8 381 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 BRF1Q92994 677 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 LIN37Q96GY3 246 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 SUCLG2Q96I99 432 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 TOX2Q96NM4 488 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 NOL6Q9H6R4 1146 aaKnown RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 GNL3LQ9NVN8 582 aaKnown RBP5.68□□□□□ -1.5
CSTF1-205ENST00000490539 POLLQ9UGP5 575 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 HDAC9Q9UKV0 1011 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 DDX19BQ9UMR2 479 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF281Q9Y2X9 895 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 FER1L6Q2WGJ9 1857 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 MYO3BQ8WXR4 1341 aa5.68□□□□□ -1.5
CSTF1-205ENST00000490539 MED23Q9ULK4 1368 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 LAMB2P55268 1798 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 THSD7BQ9C0I4 1608 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 SBF1O95248 1867 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 TMEM82A0PJX8 343 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 ANKRD34BA5PLL1 514 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 PRRG2O14669 202 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 SHOXO15266 292 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 RAD17O75943 681 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 GSTM1P09488 218 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 SLC5A1P13866 664 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 DNAJA1P31689 397 aaKnown RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 EPHX2P34913 555 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 TRHRP34981 398 aaPredicted RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 ARL4AP40617 200 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 IL15P40933 162 aaPredicted RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 ZNF143P52747 638 aaPredicted RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 G3BP1Q13283 466 aaKnown RBP eCLIP5.67□□□□□ -1.53e-9■■■□□ 18.8
CSTF1-205ENST00000490539 UBE4AQ14139 1066 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 PUM3Q15397 648 aaKnown RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 HSP90AB4PQ58FF6 505 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 GORABQ5T7V8 394 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 KIAA1211LQ6NV74 962 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 GALNT18Q6P9A2 607 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 CYP2R1Q6VVX0 501 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 USP50Q70EL3 339 aaPredicted RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 LDHDQ86WU2 507 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 JAMLQ86YT9 394 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 SLC43A3Q8NBI5 491 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 AGBL3Q8NEM8 1001 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 DPF2Q92785 391 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 PPP1R16BQ96T49 567 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 APBA2Q99767 749 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 EPB41L4BQ9H329 900 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 NSUN3Q9H649 340 aaKnown RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 DBNDD1Q9H9R9 158 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 DCP1AQ9NPI6 582 aaPredicted RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 ADARB2Q9NS39 739 aaKnown RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 ACTR10Q9NZ32 417 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 PCDHB10Q9UN67 800 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 LRRFIP2Q9Y608 721 aaKnown RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 MRVI1Q9Y6F6 885 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 TAF6LQ9Y6J9 622 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 DDX60Q8IY21 1712 aaKnown RBP5.67□□□□□ -1.5
CSTF1-205ENST00000490539 NCANO14594 1321 aa5.67□□□□□ -1.5
CSTF1-205ENST00000490539 CCDC88AQ3V6T2 1871 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 DICER1Q9UPY3 1922 aaKnown RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 TTC28Q96AY4 2481 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 A0A1W2PQ45 241 aaPredicted RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 A0A1W2PQY0 241 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 EYA2O00167 538 aa5.66□□□□□ -1.5
CSTF1-205ENST00000490539 NOP56O00567 594 aaKnown RBP5.66□□□□□ -1.5
CSTF1-205ENST00000490539 MYO1BO43795 1136 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms