RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 ITGB3BPQ13352 177 aaPredicted RBP22.43■■□□□ 1.18
UPK3B-205ENST00000490360 KCNT2Q6UVM3 1135 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 ABHD15Q6UXT9 468 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 NIPA1Q7RTP0 329 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 TMC7Q7Z402 723 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 ABI1Q8IZP0 508 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 LRRC43Q8N309 656 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 CYP2W1Q8TAV3 490 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 GLT8D2Q9H1C3 349 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 ADAM7Q9H2U9 754 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 CDHR5Q9HBB8 845 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 SPG21Q9NZD8 308 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 SLC12A7Q9Y666 1083 aa22.43■■□□□ 1.18
UPK3B-205ENST00000490360 SH2B2O14492 632 aaPredicted RBP22.42■■□□□ 1.18
UPK3B-205ENST00000490360 SGSM2O43147 1006 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 ARP10275 920 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 FGFR1P11362 822 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 GSPT1P15170 499 aaKnown RBP22.42■■□□□ 1.18
UPK3B-205ENST00000490360 MTHFRP42898 656 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 SMC1AQ14683 1233 aaKnown RBP22.42■■□□□ 1.18
UPK3B-205ENST00000490360 PPP1R18Q6NYC8 613 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 MIS18BP1Q6P0N0 1132 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 LLGL2Q6P1M3 1020 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 PDXDC2PQ6P474 469 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 TMTC3Q6ZXV5 915 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 CMTR1Q8N1G2 835 aaKnown RBP22.42■■□□□ 1.18
UPK3B-205ENST00000490360 FANCBQ8NB91 859 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 RIC8AQ9NPQ8 531 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 ZNF302Q9NR11 478 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 TSHZ2Q9NRE2 1034 aa22.42■■□□□ 1.18
UPK3B-205ENST00000490360 HIDE1A8MVS5 230 aa22.41■■□□□ 1.18
UPK3B-205ENST00000490360 APOBRQ0VD83 1088 aa22.41■■□□□ 1.18
UPK3B-205ENST00000490360 DSC3Q14574 896 aa22.41■■□□□ 1.18
UPK3B-205ENST00000490360 KIZQ2M2Z5 673 aa22.41■■□□□ 1.18
UPK3B-205ENST00000490360 FAM228AQ86W67 206 aa22.41■■□□□ 1.18
UPK3B-205ENST00000490360 MRPL43Q8N983 215 aaKnown RBP22.41■■□□□ 1.18
UPK3B-205ENST00000490360 CASD1Q96PB1 797 aa22.41■■□□□ 1.18
UPK3B-205ENST00000490360 CEP131Q9UPN4 1083 aa22.41■■□□□ 1.18
UPK3B-205ENST00000490360 MYH9P35579 1960 aaKnown RBP22.41■■□□□ 1.18
UPK3B-205ENST00000490360 CARNS1A5YM72 827 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 PDGFBP01127 241 aaPredicted RBP22.4■■□□□ 1.18
UPK3B-205ENST00000490360 ZSCAN20P17040 1043 aaPredicted RBP22.4■■□□□ 1.18
UPK3B-205ENST00000490360 AP3B2Q13367 1082 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 PLCD3Q8N3E9 789 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 CCDC82Q8N4S0 544 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 BBXQ8WY36 941 aaPredicted RBP22.4■■□□□ 1.18
UPK3B-205ENST00000490360 RSPH1Q8WYR4 309 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 OSMRQ99650 979 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 APOL5Q9BWW9 433 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 HCSTQ9UBK5 93 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 RBM8AQ9Y5S9 174 aaKnown RBP22.4■■□□□ 1.18
UPK3B-205ENST00000490360 HCFC2Q9Y5Z7 792 aa22.4■■□□□ 1.18
UPK3B-205ENST00000490360 MYO15AQ9UKN7 3530 aa22.39■■□□□ 1.18
UPK3B-205ENST00000490360 hCG_1642624A0A1W2PR95 340 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 hCG_1984214I3L0E3 225 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 MAGEB2O15479 319 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 CCNE2O96020 404 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 ZNF76P36508 570 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 SREBF1P36956 1147 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 CLCN5P51795 746 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 NAPAP54920 295 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 MCTP2Q6DN12 878 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 ASTLQ6HA08 431 aaPredicted RBP22.39■■□□□ 1.17
UPK3B-205ENST00000490360 ZDHHC14Q8IZN3 488 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 ZNF713Q8N859 430 aaPredicted RBP22.39■■□□□ 1.17
UPK3B-205ENST00000490360 ANO3Q9BYT9 981 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 USTQ9Y2C2 406 aa22.39■■□□□ 1.17
UPK3B-205ENST00000490360 PRR23AA6NEV1 266 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 ZBTB42B2RXF5 422 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 GPR32O75388 356 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 C22orf31O95567 290 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 BRD1O95696 1058 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 RXRAP19793 462 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 SP100P23497 879 aaPredicted RBP22.38■■□□□ 1.17
UPK3B-205ENST00000490360 ADCY7P51828 1080 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 SYNE3Q6ZMZ3 975 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 LRRC55Q6ZSA7 311 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 ASCL5Q7RTU5 278 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 ERMP1Q7Z2K6 904 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 CCDC60Q8IWA6 550 aaPredicted RBP22.38■■□□□ 1.17
UPK3B-205ENST00000490360 CKAP2LQ8IYA6 745 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 METTL13Q8N6R0 699 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 POMKQ9H5K3 350 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 DZANK1Q9NVP4 752 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 VPS13AQ96RL7 3174 aa22.38■■□□□ 1.17
UPK3B-205ENST00000490360 C2orf71A6NGG8 1288 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 C2CD4DB7Z1M9 353 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 TMOD1P28289 359 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 GIT2Q14161 759 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 WWC2Q6AWC2 1192 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 SWSAP1Q6NVH7 229 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 SGMS1Q86VZ5 419 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 TMEM105Q8N8V8 129 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 MAP7D2Q96T17 732 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 MRPL9Q9BYD2 267 aaKnown RBP22.37■■□□□ 1.17
UPK3B-205ENST00000490360 MFSD1Q9H3U5 465 aa22.37■■□□□ 1.17
UPK3B-205ENST00000490360 RBM28Q9NW13 759 aaKnown RBP22.37■■□□□ 1.17
UPK3B-205ENST00000490360 MAFBQ9Y5Q3 323 aaPredicted RBP22.37■■□□□ 1.17
UPK3B-205ENST00000490360 EOMESO95936 686 aa22.36■■□□□ 1.17
UPK3B-205ENST00000490360 EIF4BP23588 611 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms