RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 HOOK2Q96ED9 719 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 ZNF341Q9BYN7 854 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 MAF1Q9H063 256 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 UNC45AQ9H3U1 944 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 LARSQ9P2J5 1176 aaKnown RBP16.37■□□□□ 0.21
COL9A1-208ENST00000489611 INTUQ9ULD6 942 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 PCDHGC5Q9Y5F6 944 aa16.37■□□□□ 0.21
COL9A1-208ENST00000489611 MYH11P35749 1972 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 CES2O00748 559 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 TGFB1I1O43294 461 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 CHMP2AO43633 222 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 FLOT1O75955 427 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 XRRA1Q6P2D8 792 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 FAM186BQ8IYM0 893 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 BORCS6Q96GS4 357 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 LXNQ9BS40 222 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 TMEM206Q9H813 350 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 MYH10P35580 1976 aa16.36■□□□□ 0.21
COL9A1-208ENST00000489611 ZNF536O15090 1300 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 SRGAP2O75044 1071 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 FERP16591 822 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
COL9A1-208ENST00000489611 CFAP221Q4G0U5 840 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 DCAF17Q5H9S7 520 aaPredicted RBP16.35■□□□□ 0.21
COL9A1-208ENST00000489611 ODR4Q5SWX8 454 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 TCERG1LQ5VWI1 586 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 MIER3Q7Z3K6 550 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 APOBEC3FQ8IUX4 373 aaKnown RBP16.35■□□□□ 0.21
COL9A1-208ENST00000489611 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 CAPZA3Q96KX2 299 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 MLXIPQ9HAP2 919 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 MED4Q9NPJ6 270 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 DMAC2Q9NW81 257 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 ZMYM2Q9UBW7 1377 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 GRID2IPA4D2P6 1211 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 ARP10275 920 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 CASP8Q14790 479 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 DPY19L2Q6NUT2 758 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 IWS1Q96ST2 819 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL9A1-208ENST00000489611 ZMYND15Q9H091 742 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
COL9A1-208ENST00000489611 KCNH7Q9NS40 1196 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 FBXO28Q9NVF7 368 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 UBIAD1Q9Y5Z9 338 aa16.35■□□□□ 0.21
COL9A1-208ENST00000489611 TAL1P17542 331 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-208ENST00000489611 OAS2P29728 719 aaKnown RBP16.34■□□□□ 0.21
COL9A1-208ENST00000489611 NAP1L1P55209 391 aaKnown RBP16.34■□□□□ 0.21
COL9A1-208ENST00000489611 HSP90B2PQ58FF3 399 aa16.34■□□□□ 0.21
COL9A1-208ENST00000489611 ZNF771Q7L3S4 317 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-208ENST00000489611 LMBR1Q8WVP7 490 aa16.34■□□□□ 0.21
COL9A1-208ENST00000489611 CLEC4DQ8WXI8 215 aa16.34■□□□□ 0.21
COL9A1-208ENST00000489611 FIZ1Q96SL8 496 aa16.34■□□□□ 0.21
COL9A1-208ENST00000489611 STRA6Q9BX79 667 aa16.34■□□□□ 0.21
COL9A1-208ENST00000489611 ADAMTS1Q9UHI8 967 aa16.34■□□□□ 0.21
COL9A1-208ENST00000489611 FZD1Q9UP38 647 aa16.34■□□□□ 0.21
COL9A1-208ENST00000489611 A0A087X0T9 212 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 A0A0A6YYK5 440 aaPredicted RBP16.33■□□□□ 0.21
COL9A1-208ENST00000489611 FAM228BP0C875 321 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 ITGB5P18084 799 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 SLC9A1P19634 815 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 INPP5BP32019 993 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 STAT1P42224 750 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 JAM2P57087 298 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 DLK2Q6UY11 383 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 C12orf56Q8IXR9 622 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 SPATA4Q8NEY3 305 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 RDM1Q8NG50 284 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 TLR10Q9BXR5 811 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 ST6GALNAC4Q9H4F1 302 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 TCEAL9Q9UHQ7 104 aa16.33■□□□□ 0.21
COL9A1-208ENST00000489611 CTDP1Q9Y5B0 961 aaPredicted RBP16.33■□□□□ 0.21
COL9A1-208ENST00000489611 MAPK13O15264 365 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 N4BP1O75113 896 aaKnown RBP16.33■□□□□ 0.2
COL9A1-208ENST00000489611 ZBED4O75132 1171 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 PPP1R37O75864 691 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 TFRCP02786 760 aaKnown RBP16.33■□□□□ 0.2
COL9A1-208ENST00000489611 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.2
COL9A1-208ENST00000489611 SFNP31947 248 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 QARSP47897 775 aaKnown RBP16.33■□□□□ 0.2
COL9A1-208ENST00000489611 JAK3P52333 1124 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 PTK2Q05397 1052 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 DCAF15Q66K64 600 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 CALR3Q96L12 384 aaKnown RBP16.33■□□□□ 0.2
COL9A1-208ENST00000489611 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
COL9A1-208ENST00000489611 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
COL9A1-208ENST00000489611 ZNF185O15231 689 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 P4HA2O15460 535 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 MAFGO15525 162 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms