RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CCNE1P24864 410 aa23.1■■□□□ 1.29
SND1-214ENST00000489417 MAP2K1Q02750 393 aaPredicted RBP23.1■■□□□ 1.29
SND1-214ENST00000489417 TARBP2Q15633 366 aaKnown RBP23.1■■□□□ 1.29
SND1-214ENST00000489417 FAM102BQ5T8I3 360 aa23.1■■□□□ 1.29
SND1-214ENST00000489417 SPATA1Q5VX52 437 aa23.1■■□□□ 1.29
SND1-214ENST00000489417 ZNF296Q8WUU4 475 aaPredicted RBP23.1■■□□□ 1.29
SND1-214ENST00000489417 P2RX5Q93086 422 aa23.1■■□□□ 1.29
SND1-214ENST00000489417 LENG1Q96BZ8 264 aaPredicted RBP23.1■■□□□ 1.29
SND1-214ENST00000489417 PDLIM7Q9NR12 457 aa23.1■■□□□ 1.29
SND1-214ENST00000489417 NFE2L3Q9Y4A8 694 aa23.1■■□□□ 1.29
SND1-214ENST00000489417 KIF20AO95235 890 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 RFC5P40937 340 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 POLGP54098 1239 aaPredicted RBP23.09■■□□□ 1.29
SND1-214ENST00000489417 DGKDQ16760 1214 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 ODR4Q5SWX8 454 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 CEP89Q96ST8 783 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 BEGAINQ9BUH8 593 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 AP5M1Q9H0R1 490 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 MRPL44Q9H9J2 332 aaKnown RBP23.09■■□□□ 1.29
SND1-214ENST00000489417 XPNPEP1Q9NQW7 623 aa23.09■■□□□ 1.29
SND1-214ENST00000489417 LARSQ9P2J5 1176 aaKnown RBP23.09■■□□□ 1.29
SND1-214ENST00000489417 BICDL2A1A5D9 508 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 A6NJR5 290 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 HBP1O60381 514 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 PLS3P13797 630 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 DEKP35659 375 aaKnown RBP23.08■■□□□ 1.29
SND1-214ENST00000489417 C1QTNF8P60827 252 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 TRIM32Q13049 653 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 EMC2Q15006 297 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 EPM2AIP1Q7L775 607 aaPredicted RBP23.08■■□□□ 1.29
SND1-214ENST00000489417 FAM178BQ8IXR5 827 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 ANP32BQ92688 251 aaKnown RBP23.08■■□□□ 1.29
SND1-214ENST00000489417 KIFAP3Q92845 792 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 HSD3B7Q9H2F3 369 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 DHX33Q9H6R0 707 aaKnown RBP23.08■■□□□ 1.29
SND1-214ENST00000489417 GPRC5CQ9NQ84 441 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 FANCLQ9NW38 375 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 TRPC6Q9Y210 931 aa23.08■■□□□ 1.29
SND1-214ENST00000489417 TRIM49BA6NDI0 452 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 ADCY3O60266 1144 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 ZNF286BP0CG31 522 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 MYBP10242 640 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 ELNP15502 786 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 CASP5P51878 434 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 PLCB2Q00722 1185 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 CACNB2Q08289 660 aaPredicted RBP23.08■■□□□ 1.28
SND1-214ENST00000489417 TPD52L1Q16890 204 aaPredicted RBP23.08■■□□□ 1.28
SND1-214ENST00000489417 RAET1EQ8TD07 263 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 SCFD1Q8WVM8 642 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 C16orf70Q9BSU1 422 aa23.08■■□□□ 1.28
SND1-214ENST00000489417 ZNF215Q9UL58 517 aaPredicted RBP23.08■■□□□ 1.28
SND1-214ENST00000489417 DUSP11O75319 330 aaKnown RBP23.07■■□□□ 1.28
SND1-214ENST00000489417 GCNT3O95395 438 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 MAPTP10636 758 aaKnown RBP23.07■■□□□ 1.28
SND1-214ENST00000489417 NMT1P30419 496 aaKnown RBP23.07■■□□□ 1.28
SND1-214ENST00000489417 PMS1P54277 932 aaKnown RBP23.07■■□□□ 1.28
SND1-214ENST00000489417 PRMT2P55345 433 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 CENPPQ6IPU0 288 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 TTI2Q6NXR4 508 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 STXBP4Q6ZWJ1 553 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 SLC7A3Q8WY07 619 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 FIZ1Q96SL8 496 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 SEMA6BQ9H3T3 888 aa23.07■■□□□ 1.28
SND1-214ENST00000489417 EIF3DO15371 548 aaKnown RBP eCLIP23.06■■□□□ 1.28
SND1-214ENST00000489417 AP5Z1O43299 807 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 HMGCRP04035 888 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 CPT1AP50416 773 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 RTP1P59025 263 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 BMT2Q1RMZ1 405 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 BRDTQ58F21 947 aaPredicted RBP23.06■■□□□ 1.28
SND1-214ENST00000489417 NELFCDQ8IXH7 590 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 RNPEPQ9H4A4 650 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 C17orf75Q9HAS0 396 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 TSKSQ9UJT2 592 aa23.06■■□□□ 1.28
SND1-214ENST00000489417 ZBTB42B2RXF5 422 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 H3BRB1 525 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 SEPT4O43236 478 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 MAFO75444 373 aaPredicted RBP23.05■■□□□ 1.28
SND1-214ENST00000489417 PRKAR2AP13861 404 aaKnown RBP23.05■■□□□ 1.28
SND1-214ENST00000489417 CNGA1P29973 690 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 SOX10P56693 466 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 TBC1D8BQ0IIM8 1120 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 ZNF484Q5JVG2 852 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 ANKRD40Q6AI12 368 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 SARM1Q6SZW1 724 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 ZNF720Q7Z2F6 126 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 EXOC8Q8IYI6 725 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 ZNF507Q8TCN5 953 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 PXYLP1Q8TE99 480 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 TSG101Q99816 390 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 DUSP9Q99956 384 aaKnown RBP23.05■■□□□ 1.28
SND1-214ENST00000489417 POLR3FQ9H1D9 316 aaPredicted RBP23.05■■□□□ 1.28
SND1-214ENST00000489417 TUT1Q9H6E5 874 aaKnown RBP23.05■■□□□ 1.28
SND1-214ENST00000489417 UBE4BO95155 1302 aa23.05■■□□□ 1.28
SND1-214ENST00000489417 K7ENM7 598 aa23.04■■□□□ 1.28
SND1-214ENST00000489417 PRPF6O94906 941 aaKnown RBP23.04■■□□□ 1.28
SND1-214ENST00000489417 ZNF18P17022 549 aa23.04■■□□□ 1.28
SND1-214ENST00000489417 PEX3P56589 373 aa23.04■■□□□ 1.28
SND1-214ENST00000489417 LRRC63Q05C16 580 aa23.04■■□□□ 1.28
SND1-214ENST00000489417 FOXR2Q6PJQ5 311 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms