RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 RBM23Q86U06 439 aaKnown RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 SMAP1Q8IYB5 467 aaPredicted RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 REXO1Q8N1G1 1221 aaKnown RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 SMRP1Q8NCR6 262 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 CCDC12Q8WUD4 166 aaPredicted RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 UPF3BQ9BZI7 483 aaKnown RBP14.06□□□□□ -0.16
CPSF3-204ENST00000489403 C6orf50Q9HD87 102 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 GABBR1Q9UBS5 961 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 MUTYHQ9UIF7 546 aa14.06□□□□□ -0.16
CPSF3-204ENST00000489403 PRPF3O43395 683 aaKnown RBP14.05□□□□□ -0.16
CPSF3-204ENST00000489403 PPFIA3O75145 1194 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 PSAPP07602 524 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 FGFR1P11362 822 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 CIITAP33076 1130 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 CLCN3P51790 818 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 PRR16Q569H4 304 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 METTL13Q8N6R0 699 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 PHKBQ93100 1093 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 LENG9Q96B70 501 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 JAKMIP1Q96N16 626 aaKnown RBP14.05□□□□□ -0.16
CPSF3-204ENST00000489403 CWH43Q9H720 699 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 BARX2Q9UMQ3 279 aaPredicted RBP14.05□□□□□ -0.16
CPSF3-204ENST00000489403 PCDHB12Q9Y5F1 795 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 PCDHA10Q9Y5I2 948 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 SNX14Q9Y5W7 946 aa14.05□□□□□ -0.16
CPSF3-204ENST00000489403 EDIL3O43854 480 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 FGF18O76093 207 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 GNA11P29992 359 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 HSPA4P34932 840 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 UBE3AQ05086 875 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 COASYQ13057 564 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 DSC3Q14574 896 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 NTRK3Q16288 839 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 HERC4Q5GLZ8 1057 aaPredicted RBP14.04□□□□□ -0.16
CPSF3-204ENST00000489403 BLOC1S2Q6QNY1 142 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 RNF135Q8IUD6 432 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 LINC01465Q8N7H1 131 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 AGXT2Q9BYV1 514 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 ELAC1Q9H777 363 aaKnown RBP14.04□□□□□ -0.16
CPSF3-204ENST00000489403 TLR9Q9NR96 1032 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 AAASQ9NRG9 546 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
CPSF3-204ENST00000489403 TMEM161AQ9NX61 479 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 TCEAL9Q9UHQ7 104 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 CEP131Q9UPN4 1083 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 SAMM50Q9Y512 469 aa14.04□□□□□ -0.16
CPSF3-204ENST00000489403 PER2O15055 1255 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 ZNF862O60290 1169 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 ERVFC1P60507 584 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 FAM189BP81408 668 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 EFCAB12Q6NXP0 572 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 HFE2Q6ZVN8 426 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 FBXL16Q8N461 479 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 FAM167AQ96KS9 214 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 RNF26Q9BY78 433 aaPredicted RBP14.03□□□□□ -0.16
CPSF3-204ENST00000489403 ATP6V0A4Q9HBG4 840 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 RNF19AQ9NV58 838 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 VPS54Q9P1Q0 977 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 AKT3Q9Y243 479 aa14.03□□□□□ -0.16
CPSF3-204ENST00000489403 WDFY4Q6ZS81 3184 aa14.02□□□□□ -0.16
CPSF3-204ENST00000489403 WDR64B1ANS9 1081 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 LOC730098B7Z3J9 87 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 FSCN2O14926 492 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 MSH4O15457 936 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 MAGEB2O15479 319 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 OATP04181 439 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 LAG3P18627 525 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 RPS6KB1P23443 525 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 NLRP11P59045 1033 aaKnown RBP14.02□□□□□ -0.17
CPSF3-204ENST00000489403 RBM10P98175 930 aaKnown RBP14.02□□□□□ -0.17
CPSF3-204ENST00000489403 AKAP17AQ02040 695 aaKnown RBP14.02□□□□□ -0.17
CPSF3-204ENST00000489403 UGCGQ16739 394 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 DUSP6Q16828 381 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 LRRC71Q8N4P6 559 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 CCDC148Q8NFR7 591 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 VN1R2Q8NFZ6 395 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 BICD2Q8TD16 824 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 MICAL1Q8TDZ2 1067 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 CASD1Q96PB1 797 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 CDCA3Q99618 268 aaPredicted RBP14.02□□□□□ -0.17
CPSF3-204ENST00000489403 SLC26A6Q9BXS9 759 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 ADAMTS10Q9H324 1103 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 TLE6Q9H808 572 aa14.02□□□□□ -0.17
CPSF3-204ENST00000489403 USP15Q9Y4E8 981 aaPredicted RBP14.02□□□□□ -0.17
CPSF3-204ENST00000489403 IFNAR1P17181 557 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 TMOD1P28289 359 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 PLCB3Q01970 1234 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 PRKCEQ02156 737 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 PLPP4Q5VZY2 271 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 LRRC55Q6ZSA7 311 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 EDAQ92838 391 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 ZNF668Q96K58 619 aaPredicted RBP14.01□□□□□ -0.17
CPSF3-204ENST00000489403 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 TMEM117Q9H0C3 514 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 NCOA5Q9HCD5 579 aaKnown RBP14.01□□□□□ -0.17
CPSF3-204ENST00000489403 DISC1Q9NRI5 854 aa14.01□□□□□ -0.17
CPSF3-204ENST00000489403 TRIOO75962 3097 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms