RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	IRF6	O14896	467 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	HIP1R	O75146	1068 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	EIF3J	O75822	258 aa	Known RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	SLC25A27	O95847	323 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	AFP	P02771	609 aa	Known RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	PSAP	P07602	524 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	RSPH10B	P0C881	870 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	SCP2	P22307	547 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	ICAM3	P32942	547 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	HOXD13	P35453	343 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	PSMC2	P35998	433 aa	Known RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	TM4SF4	P48230	202 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	RARRES1	P49788	294 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	KCNMA1	Q12791	1236 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	DGKZ	Q13574	1117 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	MTF1	Q14872	753 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	STXBP2	Q15833	593 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	ODR4	Q5SWX8	454 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	SPRYD7	Q5W111	196 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	WDR59	Q6PJI9	974 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	FASTKD5	Q7L8L6	764 aa	Known RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	CACNA2D4	Q7Z3S7	1137 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	FMNL3	Q8IVF7	1028 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	BANK1	Q8NDB2	785 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	ATP6V0A1	Q93050	837 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	HVCN1	Q96D96	273 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	CCDC42	Q96M95	316 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	CCDC43	Q96MW1	224 aa	Known RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	MPHOSPH6	Q99547	160 aa	Known RBP	11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	CHP1	Q99653	195 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	STRA6	Q9BX79	667 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	FGFBP2	Q9BYJ0	223 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	TSGA10	Q9BZW7	698 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	GBP3	Q9H0R5	595 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	FBXL5	Q9UKA1	691 aa		11.91	□□□□□ -0.5
ITSN1-231	ENST00000489261	PHIP	Q8WWQ0	1821 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	LOC102724159	A0A0B4J2E5	919 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	SSU72P8	A0A1W2PR75	194 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	TESPA1	A2RU30	521 aa	Predicted RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	DDX39A	O00148	427 aa	Known RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	TGFB1I1	O43294	461 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	KRT86	O43790	486 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	ZBTB48	P10074	688 aa	Predicted RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	XRCC5	P13010	732 aa	Known RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	PLS3	P13797	630 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	YWHAB	P31946	246 aa	Known RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	CASP5	P51878	434 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	KCNH2	Q12809	1159 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	PPP2R5A	Q15172	486 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	PWP2	Q15269	919 aa	Known RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	SPA17	Q15506	151 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	PDXDC1	Q6P996	788 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	C12orf56	Q8IXR9	622 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	VTI1A	Q96AJ9	217 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	EEF2KMT	Q96G04	330 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	WNK4	Q96J92	1243 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	CLMN	Q96JQ2	1002 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	ACCS	Q96QU6	501 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	FIZ1	Q96SL8	496 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	DESI2	Q9BSY9	194 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	LUC7L	Q9NQ29	371 aa	Known RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	A1CF	Q9NQ94	594 aa	Known RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	DMAC2	Q9NW81	257 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	KCNH4	Q9UQ05	1017 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	FRMD4B	Q9Y2L6	1034 aa		11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	BZW2	Q9Y6E2	419 aa	Known RBP	11.9	□□□□□ -0.5
ITSN1-231	ENST00000489261	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.9	□□□□□ -0.51
ITSN1-231	ENST00000489261	SPDYE5	A6NIY4	337 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261		H0YCG3	227 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	MAPK13	O15264	365 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	USO1	O60763	962 aa	Known RBP	11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	ATP9A	O75110	1047 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	TRPA1	O75762	1119 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	PPP1R37	O75864	691 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	URI1	O94763	535 aa	Predicted RBP	11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	LCA5L	O95447	670 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	OSBP	P22059	807 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	ANXA13	P27216	316 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	NMT1	P30419	496 aa	Known RBP	11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	SMTN	P53814	917 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	RTP1	P59025	263 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	MAPK7	Q13164	816 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	PPIL2	Q13356	520 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	PLS1	Q14651	629 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	SFMBT2	Q5VUG0	894 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	MIS18BP1	Q6P0N0	1132 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	BAP1	Q92560	729 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	ZFP91	Q96JP5	570 aa	Predicted RBP	11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	EXOC7	Q9UPT5	735 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	PTPRF	P10586	1907 aa		11.89	□□□□□ -0.51
ITSN1-231	ENST00000489261	ASTN1	O14525	1302 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	PARP14	Q460N5	1801 aa		11.88	□□□□□ -0.51
ITSN1-231	ENST00000489261	RLF	Q13129	1914 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms