RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ERVFC1P60507 584 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 PLCB3Q01970 1234 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 SIGLEC14Q08ET2 396 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 MCTP2Q6DN12 878 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 ZNF710Q8N1W2 664 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 FBXL6Q8N531 539 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 VN1R2Q8NFZ6 395 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 OSMRQ99650 979 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 TBC1D22BQ9NU19 505 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 MAFBQ9Y5Q3 323 aaPredicted RBP21.63■■□□□ 1.05
GGPS1-206ENST00000488594 IGLV3-22A0A075B6J6 115 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 FGFR1P11362 822 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 RCAN1P53805 252 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 SETQ01105 290 aaPredicted RBP21.62■■□□□ 1.05
GGPS1-206ENST00000488594 ZNF746Q6NUN9 644 aaPredicted RBP21.62■■□□□ 1.05
GGPS1-206ENST00000488594 DHX32Q7L7V1 743 aaKnown RBP21.62■■□□□ 1.05
GGPS1-206ENST00000488594 FAM228AQ86W67 206 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 SMAP1Q8IYB5 467 aaPredicted RBP21.62■■□□□ 1.05
GGPS1-206ENST00000488594 RASGRP4Q8TDF6 673 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 CRYGNQ8WXF5 182 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 MRPS27Q92552 414 aaKnown RBP21.62■■□□□ 1.05
GGPS1-206ENST00000488594 ZNF577Q9BSK1 485 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 TMEM117Q9H0C3 514 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 NGRNQ9NPE2 291 aaKnown RBP21.62■■□□□ 1.05
GGPS1-206ENST00000488594 TCEAL9Q9UHQ7 104 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 BRPF3Q9ULD4 1205 aa21.62■■□□□ 1.05
GGPS1-206ENST00000488594 GOLGA8AA7E2F4 631 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 GOLGA8BA8MQT2 603 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 MAGEB2O15479 319 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 GPR32O75388 356 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 ATP4AP20648 1035 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 PPM1AP35813 382 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 EXOSC10Q01780 885 aaKnown RBP21.61■■□□□ 1.05
GGPS1-206ENST00000488594 DSC3Q14574 896 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 METTL13Q8N6R0 699 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 PRSS33Q8NF86 280 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 CWH43Q9H720 699 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 PLXNA4Q9HCM2 1894 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 LOXHD1Q8IVV2 1947 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 PSAPP07602 524 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 HOXB8P17481 243 aaPredicted RBP21.61■■□□□ 1.05
GGPS1-206ENST00000488594 RBM10P98175 930 aaKnown RBP21.61■■□□□ 1.05
GGPS1-206ENST00000488594 KCNC3Q14003 757 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 IER5LQ5T953 404 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 JAKMIP3Q5VZ66 844 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 TCF25Q9BQ70 676 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 HCSTQ9UBK5 93 aa21.61■■□□□ 1.05
GGPS1-206ENST00000488594 WDFY4Q6ZS81 3184 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 ESYT2A0FGR8 921 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 VTNP04004 478 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 KRT17Q04695 432 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 PFKFB3Q16875 520 aaPredicted RBP21.6■■□□□ 1.05
GGPS1-206ENST00000488594 FNDC1Q4ZHG4 1894 aaPredicted RBP21.6■■□□□ 1.05
GGPS1-206ENST00000488594 ANKRD54Q6NXT1 300 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 ABI1Q8IZP0 508 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 LRRC43Q8N309 656 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 FAM167AQ96KS9 214 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 MAP7D2Q96T17 732 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 PPP1R16BQ96T49 567 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 S1PR5Q9H228 398 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 ENTPD7Q9NQZ7 604 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 PCDHA10Q9Y5I2 948 aa21.6■■□□□ 1.05
GGPS1-206ENST00000488594 KLF18A0A0U1RQI7 1052 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 CCDC196A0A1B0GTZ2 297 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 ZSCAN20P17040 1043 aaPredicted RBP21.59■■□□□ 1.05
GGPS1-206ENST00000488594 TMOD1P28289 359 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 TECP42680 631 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 KRT32Q14532 448 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 PTPN21Q16825 1174 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 TSGA10IPQ3SY00 556 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 PLPP4Q5VZY2 271 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 KCNT2Q6UVM3 1135 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 CCDC12Q8WUD4 166 aaPredicted RBP21.59■■□□□ 1.05
GGPS1-206ENST00000488594 TCEANC2Q96MN5 208 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 ZNF558Q96NG5 402 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 CASD1Q96PB1 797 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 ZMYND12Q9H0C1 365 aa21.59■■□□□ 1.05
GGPS1-206ENST00000488594 FAM217BQ9NTX9 383 aaPredicted RBP21.59■■□□□ 1.05
GGPS1-206ENST00000488594 TRIOO75962 3097 aa21.58■■□□□ 1.05
GGPS1-206ENST00000488594 HMGB1P09429 215 aaKnown RBP21.58■■□□□ 1.04
GGPS1-206ENST00000488594 REXO1Q8N1G1 1221 aaKnown RBP21.58■■□□□ 1.04
GGPS1-206ENST00000488594 ASIC4Q96FT7 647 aa21.58■■□□□ 1.04
GGPS1-206ENST00000488594 IRF2BPLQ9H1B7 796 aa21.58■■□□□ 1.04
GGPS1-206ENST00000488594 C6orf50Q9HD87 102 aa21.58■■□□□ 1.04
GGPS1-206ENST00000488594 GABBR1Q9UBS5 961 aa21.58■■□□□ 1.04
GGPS1-206ENST00000488594 AKT3Q9Y243 479 aa21.58■■□□□ 1.04
GGPS1-206ENST00000488594 EIF4BP23588 611 aaKnown RBP21.57■■□□□ 1.04
GGPS1-206ENST00000488594 CDC27P30260 824 aa21.57■■□□□ 1.04
GGPS1-206ENST00000488594 NLRP11P59045 1033 aaKnown RBP21.57■■□□□ 1.04
GGPS1-206ENST00000488594 APOBRQ0VD83 1088 aa21.57■■□□□ 1.04
GGPS1-206ENST00000488594 SYCE2Q6PIF2 218 aa21.57■■□□□ 1.04
GGPS1-206ENST00000488594 LRRC55Q6ZSA7 311 aa21.57■■□□□ 1.04
GGPS1-206ENST00000488594 TRMT1LQ7Z2T5 733 aaKnown RBP21.57■■□□□ 1.04
GGPS1-206ENST00000488594 SPG21Q9NZD8 308 aa21.57■■□□□ 1.04
GGPS1-206ENST00000488594 WDR64B1ANS9 1081 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 GNA11P29992 359 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 CLCN3P51790 818 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 TCF15Q12870 199 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 TPRNQ4KMQ1 711 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 PRR16Q569H4 304 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms