RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 LPIN1Q14693 890 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 ODR4Q5SWX8 454 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 PLA2G4FQ68DD2 849 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 LRRC71Q8N4P6 559 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 TET1Q8NFU7 2136 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 SH2D3AQ9BRG2 576 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 POLR3CQ9BUI4 534 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-207ENST00000488591 ZSCAN16Q9H4T2 348 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-207ENST00000488591 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.28
CXCL12-207ENST00000488591 WRAP73Q9P2S5 460 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-207ENST00000488591 AMHP03971 560 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 VTNP04004 478 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 RPA1P27694 616 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 CRYBB1P53674 252 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-207ENST00000488591 POLGP54098 1239 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-207ENST00000488591 WDR5P61964 334 aaKnown RBP16.82■□□□□ 0.28
CXCL12-207ENST00000488591 ATP2C1P98194 919 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-207ENST00000488591 RAB30Q15771 203 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
CXCL12-207ENST00000488591 FAM43BQ6ZT52 329 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-207ENST00000488591 CATSPER3Q86XQ3 398 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 LINC01465Q8N7H1 131 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 NACC1Q96RE7 527 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 CEP89Q96ST8 783 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 MSRAQ9UJ68 235 aa16.82■□□□□ 0.28
CXCL12-207ENST00000488591 IGKV6-21A0A0C4DH24 114 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 GAS2O43903 313 aaKnown RBP16.81■□□□□ 0.28
CXCL12-207ENST00000488591 MUTP22033 750 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 CCT6AP40227 531 aaKnown RBP16.81■□□□□ 0.28
CXCL12-207ENST00000488591 NLRP11P59045 1033 aaKnown RBP16.81■□□□□ 0.28
CXCL12-207ENST00000488591 PAK2Q13177 524 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 KRT79Q5XKE5 535 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 IGSF22Q8N9C0 903 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 TCP11Q8WWU5 503 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 SCLT1Q96NL6 688 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 SUCLA2Q9P2R7 463 aaPredicted RBP16.81■□□□□ 0.28
CXCL12-207ENST00000488591 MTMR6Q9Y217 621 aa16.81■□□□□ 0.28
CXCL12-207ENST00000488591 GRXCR1A8MXD5 290 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 ZBTB39O15060 712 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 MED24O75448 989 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 RPS6KA5O75582 802 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 SPATA31C1P0DKV0 1188 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 CD52P31358 61 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 RESTQ13127 1097 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 BECN1Q14457 450 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 TCTN1Q2MV58 587 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 FAM109BQ6ICB4 259 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-207ENST00000488591 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
CXCL12-207ENST00000488591 SPRYD3Q8NCJ5 442 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 PPP1R16BQ96T49 567 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 ZBED2Q9BTP6 218 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 FTHL17Q9BXU8 183 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 OSBPL7Q9BZF2 842 aa16.8■□□□□ 0.28
CXCL12-207ENST00000488591 DHX33Q9H6R0 707 aaKnown RBP16.8■□□□□ 0.28
CXCL12-207ENST00000488591 AGO3Q9H9G7 860 aaKnown RBP16.8■□□□□ 0.28
CXCL12-207ENST00000488591 GPR182O15218 404 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 GPR32O75388 356 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 DGAT1O75907 488 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 DNAJB2P25686 324 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 NFX1Q12986 1120 aaKnown RBP16.79■□□□□ 0.28
CXCL12-207ENST00000488591 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
CXCL12-207ENST00000488591 ZNF697Q5TEC3 545 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 HERC6Q8IVU3 1022 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 SNX29Q8TEQ0 813 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 NLRP7Q8WX94 980 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 OSMRQ99650 979 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 MTRQ99707 1265 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 CDHR5Q9HBB8 845 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 DBR1Q9UK59 544 aaKnown RBP16.79■□□□□ 0.28
CXCL12-207ENST00000488591 PADI3Q9ULW8 664 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 PCDHA11Q9Y5I1 949 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 SIP14410 1827 aa16.79■□□□□ 0.28
CXCL12-207ENST00000488591 TMEM265A0A087WTH1 108 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 VWA3AA6NCI4 1184 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 RARRES1P49788 294 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 GPC3P51654 580 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 RABGGTBP53611 331 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 DEFB103AP81534 67 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-207ENST00000488591 EMC2Q15006 297 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 IL17AQ16552 155 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.78■□□□□ 0.28
CXCL12-207ENST00000488591 RHPN2Q8IUC4 686 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 MYOCDQ8IZQ8 938 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 PSPC1Q8WXF1 523 aaKnown RBP16.78■□□□□ 0.28
CXCL12-207ENST00000488591 TIFAQ96CG3 184 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 GCOM2Q9BZD3 368 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-207ENST00000488591 INO80BQ9C086 356 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-207ENST00000488591 ADAMTS10Q9H324 1103 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 ATP6V0A4Q9HBG4 840 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 NOC2LQ9Y3T9 749 aaKnown RBP16.78■□□□□ 0.28
CXCL12-207ENST00000488591 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
CXCL12-207ENST00000488591 A0A087WWV3 80 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 ARHGEF35A5YM69 484 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 ASAP2O43150 1006 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms