RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 XIRP2A4UGR9 3374 aa19.94■□□□□ 0.78
ITGB1-215ENST00000488494 GPR32O75388 356 aa19.94■□□□□ 0.78
ITGB1-215ENST00000488494 RPS6KA5O75582 802 aa19.94■□□□□ 0.78
ITGB1-215ENST00000488494 STBD1O95210 358 aa19.94■□□□□ 0.78
ITGB1-215ENST00000488494 POU3F3P20264 500 aaPredicted RBP19.94■□□□□ 0.78
ITGB1-215ENST00000488494 TMOD1P28289 359 aa19.94■□□□□ 0.78
ITGB1-215ENST00000488494 CRYBB1P53674 252 aaPredicted RBP19.94■□□□□ 0.78
ITGB1-215ENST00000488494 PSMC5P62195 406 aa19.94■□□□□ 0.78
ITGB1-215ENST00000488494 TARBP2Q15633 366 aaKnown RBP19.94■□□□□ 0.78
ITGB1-215ENST00000488494 SH2D3AQ9BRG2 576 aa19.94■□□□□ 0.78
ITGB1-215ENST00000488494 LLPHQ9BRT6 129 aaKnown RBP19.94■□□□□ 0.78
ITGB1-215ENST00000488494 RC3H2Q9HBD1 1191 aaKnown RBP19.94■□□□□ 0.78
ITGB1-215ENST00000488494 EVPLQ92817 2033 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 RALGAPA2Q2PPJ7 1873 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 NLRC5Q86WI3 1866 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 DLL1O00548 723 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 WNT7AO00755 349 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 IBSPP21815 317 aaPredicted RBP19.93■□□□□ 0.78
ITGB1-215ENST00000488494 EPC2Q52LR7 807 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 PLA2G4FQ68DD2 849 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 NCAPH2Q6IBW4 605 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 RTN4RL1Q86UN2 441 aaPredicted RBP19.93■□□□□ 0.78
ITGB1-215ENST00000488494 FAM228AQ86W67 206 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 NPAS4Q8IUM7 802 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 C8orf76Q96K31 380 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 SCLT1Q96NL6 688 aa19.93■□□□□ 0.78
ITGB1-215ENST00000488494 NIFKQ9BYG3 293 aaKnown RBP19.93■□□□□ 0.78
ITGB1-215ENST00000488494 DDX11L8A8MPP1 907 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 MGEA5O60502 916 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 NEMFO60524 1076 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 QARSP47897 775 aaKnown RBP19.92■□□□□ 0.78
ITGB1-215ENST00000488494 NLRP11P59045 1033 aaKnown RBP19.92■□□□□ 0.78
ITGB1-215ENST00000488494 SPIRE1Q08AE8 756 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 RABEP1Q15276 862 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 SAFBQ15424 915 aaKnown RBP eCLIP19.92■□□□□ 0.78
ITGB1-215ENST00000488494 SKIV2LQ15477 1246 aaKnown RBP19.92■□□□□ 0.78
ITGB1-215ENST00000488494 CALCRLQ16602 461 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 ANO5Q75V66 913 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 SLFN12Q8IYM2 578 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 FIBCD1Q8N539 461 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 ZNF668Q96K58 619 aaPredicted RBP19.92■□□□□ 0.78
ITGB1-215ENST00000488494 SAMD11Q96NU1 681 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 ADAMTS10Q9H324 1103 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 UPF2Q9HAU5 1272 aaKnown RBP19.92■□□□□ 0.78
ITGB1-215ENST00000488494 ST3GAL5Q9UNP4 418 aa19.92■□□□□ 0.78
ITGB1-215ENST00000488494 PRRC2BQ5JSZ5 2229 aaKnown RBP19.92■□□□□ 0.78
ITGB1-215ENST00000488494 DENND3A2RUS2 1198 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 GPR182O15218 404 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 DGKIO75912 1065 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 BAG4O95429 457 aaKnown RBP19.91■□□□□ 0.78
ITGB1-215ENST00000488494 CTNNB1P35222 781 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 HMGN5P82970 282 aaKnown RBP19.91■□□□□ 0.78
ITGB1-215ENST00000488494 DRP2Q13474 957 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 ODR4Q5SWX8 454 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 TMEM192Q8IY95 271 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 CEP89Q96ST8 783 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 LXNQ9BS40 222 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 WRAP73Q9P2S5 460 aaPredicted RBP19.91■□□□□ 0.78
ITGB1-215ENST00000488494 TTC3P53804 2025 aa19.91■□□□□ 0.78
ITGB1-215ENST00000488494 SPTBN5Q9NRC6 3674 aaKnown RBP19.91■□□□□ 0.78
ITGB1-215ENST00000488494 SARSP49591 514 aaKnown RBP19.9■□□□□ 0.78
ITGB1-215ENST00000488494 GPC3P51654 580 aa19.9■□□□□ 0.78
ITGB1-215ENST00000488494 CYP4A11Q02928 519 aa19.9■□□□□ 0.78
ITGB1-215ENST00000488494 BTG3Q14201 252 aaPredicted RBP19.9■□□□□ 0.78
ITGB1-215ENST00000488494 CRIPAKQ8N1N5 446 aa19.9■□□□□ 0.78
ITGB1-215ENST00000488494 FAM184AQ8NB25 1140 aa19.9■□□□□ 0.78
ITGB1-215ENST00000488494 NLRP7Q8WX94 980 aa19.9■□□□□ 0.78
ITGB1-215ENST00000488494 ZNF689Q96CS4 500 aaPredicted RBP19.9■□□□□ 0.78
ITGB1-215ENST00000488494 ADAM2Q99965 735 aa19.9■□□□□ 0.78
ITGB1-215ENST00000488494 COL25A1Q9BXS0 654 aaPredicted RBP19.9■□□□□ 0.78
ITGB1-215ENST00000488494 LRFN2Q9ULH4 789 aa19.9■□□□□ 0.78
ITGB1-215ENST00000488494 ST18O60284 1047 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 DKC1O60832 514 aaKnown RBP eCLIP19.89■□□□□ 0.77
ITGB1-215ENST00000488494 P4HBP07237 508 aaKnown RBP19.89■□□□□ 0.77
ITGB1-215ENST00000488494 LINC00271P0C7V0 271 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 STAG3L1P0CL83 205 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 GATMP50440 423 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 EPHA7Q15375 998 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 PAN2Q504Q3 1202 aaKnown RBP19.89■□□□□ 0.77
ITGB1-215ENST00000488494 DYDC2Q96IM9 177 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 CYP26B1Q9NR63 512 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 RGL1Q9NZL6 768 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 LMCD1Q9NZU5 365 aa19.89■□□□□ 0.77
ITGB1-215ENST00000488494 ARID2Q68CP9 1835 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 KIAA1671Q9BY89 1806 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 IGKV6-21A0A0C4DH24 114 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 DARSP14868 501 aaKnown RBP19.88■□□□□ 0.77
ITGB1-215ENST00000488494 ATP2B1P20020 1258 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 EIF4BP23588 611 aaKnown RBP19.88■□□□□ 0.77
ITGB1-215ENST00000488494 MCM7P33993 719 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 NPEPPSP55786 919 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 CTTNQ14247 550 aaKnown RBP19.88■□□□□ 0.77
ITGB1-215ENST00000488494 TJAP1Q5JTD0 557 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 CMTR2Q8IYT2 770 aaKnown RBP19.88■□□□□ 0.77
ITGB1-215ENST00000488494 ZNF710Q8N1W2 664 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 ATXN2LQ8WWM7 1075 aaKnown RBP19.88■□□□□ 0.77
ITGB1-215ENST00000488494 RGS18Q9NS28 235 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 C1orf112Q9NSG2 853 aa19.88■□□□□ 0.77
ITGB1-215ENST00000488494 MRPL42Q9Y6G3 142 aaKnown RBP19.88■□□□□ 0.77
ITGB1-215ENST00000488494 H3BNC9 293 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms