RNA–Protein interactions for RNA: ENST00000487452.1

PPP1R35-204, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 2

Gene PPP1R35, Length 965 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-204	ENST00000487452	GPNMB	Q14956	572 aa		31.22	■■■□□ 2.59
PPP1R35-204	ENST00000487452	VWCE	Q96DN2	955 aa		31.22	■■■□□ 2.59
PPP1R35-204	ENST00000487452	SH2D3A	Q9BRG2	576 aa		31.22	■■■□□ 2.59
PPP1R35-204	ENST00000487452	CELF4	Q9BZC1	486 aa	Known RBP	31.22	■■■□□ 2.59
PPP1R35-204	ENST00000487452	DHX33	Q9H6R0	707 aa	Known RBP	31.22	■■■□□ 2.59
PPP1R35-204	ENST00000487452	TANC1	Q9C0D5	1861 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	ZBTB39	O15060	712 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	CLCN3	P51790	818 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	SHH	Q15465	462 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	POTEG	Q6S5H5	508 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	USP38	Q8NB14	1042 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	PIGO	Q8TEQ8	1089 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	HERVK_113	Q902F9	699 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	DAXX	Q9UER7	740 aa	Predicted RBP	31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	AKT3	Q9Y243	479 aa		31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	SRPRB	Q9Y5M8	271 aa	Known RBP	31.21	■■■□□ 2.59
PPP1R35-204	ENST00000487452	DGAT1	O75907	488 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	RARRES1	P49788	294 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	STK38	Q15208	465 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	C9orf50	Q5SZB4	431 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	CNKSR3	Q6P9H4	555 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	FAM43B	Q6ZT52	329 aa	Predicted RBP	31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	LRRC71	Q8N4P6	559 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	KIAA1024	Q9UPX6	916 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	ATP6V1D	Q9Y5K8	247 aa		31.2	■■■□□ 2.59
PPP1R35-204	ENST00000487452	PP2D1	A8MPX8	630 aa		31.19	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ZNF579	Q8NAF0	562 aa	Known RBP	31.19	■■■□□ 2.58
PPP1R35-204	ENST00000487452	SEPT8	Q92599	483 aa		31.19	■■■□□ 2.58
PPP1R35-204	ENST00000487452	RNPC3	Q96LT9	517 aa	Known RBP	31.19	■■■□□ 2.58
PPP1R35-204	ENST00000487452	MMTAG2	Q9BU76	263 aa	Known RBP	31.19	■■■□□ 2.58
PPP1R35-204	ENST00000487452	NT5C3A	Q9H0P0	336 aa		31.19	■■■□□ 2.58
PPP1R35-204	ENST00000487452	CFAP45	Q9UL16	551 aa		31.19	■■■□□ 2.58
PPP1R35-204	ENST00000487452	BAIAP3	O94812	1187 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	YEATS4	O95619	227 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	MARCKS	P29966	332 aa	Predicted RBP	31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	CDC25A	P30304	524 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	UBA7	P41226	1012 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	TMEM62	Q0P6H9	643 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	FBXO47	Q5MNV8	452 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	HYI	Q5T013	277 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	LINC00301	Q8NCQ3	95 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	TCP11	Q8WWU5	503 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	APBB2	Q92870	758 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	DDX19A	Q9NUU7	478 aa	Known RBP	31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	DNM3	Q9UQ16	869 aa		31.18	■■■□□ 2.58
PPP1R35-204	ENST00000487452	EFCAB14	O75071	495 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	CRYBB1	P53674	252 aa	Predicted RBP	31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	NUCB2	P80303	420 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	EMC2	Q15006	297 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ECM1	Q16610	540 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	PLEKHG4	Q58EX7	1191 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	RASIP1	Q5U651	963 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	OTOP2	Q7RTS6	562 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	KRI1	Q8N9T8	703 aa	Known RBP	31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	CDK5RAP3	Q96JB5	506 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ATP6V0A4	Q9HBG4	840 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	SUCLA2	Q9P2R7	463 aa	Predicted RBP	31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	TFIP11	Q9UBB9	837 aa	Known RBP	31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	FBXO2	Q9UK22	296 aa	Predicted RBP	31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ZDHHC9	Q9Y397	364 aa		31.17	■■■□□ 2.58
PPP1R35-204	ENST00000487452	VTN	P04004	478 aa		31.16	■■■□□ 2.58
PPP1R35-204	ENST00000487452	MKRN4P	Q13434	485 aa	Predicted RBP	31.16	■■■□□ 2.58
PPP1R35-204	ENST00000487452	LPIN1	Q14693	890 aa		31.16	■■■□□ 2.58
PPP1R35-204	ENST00000487452	TSHZ1	Q6ZSZ6	1077 aa		31.16	■■■□□ 2.58
PPP1R35-204	ENST00000487452	CABP7	Q86V35	215 aa		31.16	■■■□□ 2.58
PPP1R35-204	ENST00000487452	MTR	Q99707	1265 aa		31.16	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ABHD14A-ACY1	A0A1B0GW23	586 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ARHGEF35	A5YM69	484 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	SPTLC2	O15270	562 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	PPP6R2	O75170	966 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	GPR32	O75388	356 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	GHR	P10912	638 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	NLRP11	P59045	1033 aa	Known RBP	31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	IKBKE	Q14164	716 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	KIZ	Q2M2Z5	673 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ODR4	Q5SWX8	454 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	PSPC1	Q8WXF1	523 aa	Known RBP	31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	CALML4	Q96GE6	196 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	IFIH1	Q9BYX4	1025 aa	Known RBP	31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	GINS2	Q9Y248	185 aa		31.15	■■■□□ 2.58
PPP1R35-204	ENST00000487452	EVPL	Q92817	2033 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ASAP2	O43150	1006 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	LRIT3	Q3SXY7	679 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	MCPH1	Q8NEM0	835 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	DBF4B	Q8NFT6	615 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	KCNG4	Q8TDN1	519 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	CSRNP2	Q9H175	543 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	ADAMTS10	Q9H324	1103 aa		31.14	■■■□□ 2.58
PPP1R35-204	ENST00000487452	SCN5A	Q14524	2016 aa		31.14	■■■□□ 2.57
PPP1R35-204	ENST00000487452		A0A087WWV3	80 aa		31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	EYA4	O95677	639 aa		31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	GPC3	P51654	580 aa		31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	GRIN1	Q05586	938 aa		31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	DRP2	Q13474	957 aa		31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	ZRSR1	Q15695	479 aa	Known RBP	31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	FOXD4L3	Q6VB84	417 aa	Predicted RBP	31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	ZNF410	Q86VK4	478 aa		31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	CCSER1	Q9C0I3	900 aa		31.13	■■■□□ 2.57
PPP1R35-204	ENST00000487452	BHMT2	Q9H2M3	363 aa		31.13	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms