RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 NLRP14Q86W24 1093 aa13.49□□□□□ -0.25
TMEM39B-208ENST00000487305 CTNNBL1Q8WYA6 563 aaPredicted RBP13.49□□□□□ -0.25
TMEM39B-208ENST00000487305 LENG9Q96B70 501 aa13.49□□□□□ -0.25
TMEM39B-208ENST00000487305 ACTR5Q9H9F9 607 aaPredicted RBP13.49□□□□□ -0.25
TMEM39B-208ENST00000487305 SIX2Q9NPC8 291 aa13.49□□□□□ -0.25
TMEM39B-208ENST00000487305 ODF2LQ9ULJ1 636 aa13.49□□□□□ -0.25
TMEM39B-208ENST00000487305 NPHP3-ACAD11A0A0J9YXS1 232 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 ESYT3A0FGR9 886 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 MIF4GDA9UHW6 222 aaKnown RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 H0YGN5 161 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 GGPS1O95749 300 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 ECHS1P30084 290 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 HOXD13P35453 343 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 ALCAMQ13740 583 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 DCAF17Q5H9S7 520 aaPredicted RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 TATDN1Q6P1N9 297 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 HOOK3Q86VS8 718 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 SLC9A9Q8IVB4 645 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 RHOT2Q8IXI1 618 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 FAM186BQ8IYM0 893 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 CNPY4Q8N129 248 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 ZNF473Q8WTR7 871 aaKnown RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 CCT8L2Q96SF2 557 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 YY1AP1Q9H869 796 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 VAV3Q9UKW4 847 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 FRMD4BQ9Y2L6 1034 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 NFS1Q9Y697 457 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 ASTN1O14525 1302 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 GMNCA6NCL1 334 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 P4HA2O15460 535 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 TOM1O60784 492 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 FAM13AO94988 1023 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 GCNT3O95395 438 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 EEF2P13639 858 aaKnown RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 ERCC3P19447 782 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 CASP5P51878 434 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 CETN1Q12798 172 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 TCERG1LQ5VWI1 586 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 APOBEC3HQ6NTF7 200 aaKnown RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PODNQ7Z5L7 613 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 LOXHD1Q8IVV2 1947 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 MYCBPAPQ8TBZ2 947 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 TACO1Q9BSH4 297 aaKnown RBP13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PARVGQ9HBI0 331 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 RASAL2Q9UJF2 1139 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 PCDHB13Q9Y5F0 798 aa13.48□□□□□ -0.25
TMEM39B-208ENST00000487305 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 COL2A1P02458 1487 aaPredicted RBP13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 DDX3XO00571 662 aaKnown RBP eCLIP13.47□□□□□ -0.253e-10■■■■■ 50.4
TMEM39B-208ENST00000487305 ACTN1P12814 892 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 ALDH1B1P30837 517 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 PTENP60484 403 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 SNRPFP62306 86 aaKnown RBP13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 SYDE2Q5VT97 1194 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 NEK9Q8TD19 979 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 HINFPQ9BQA5 517 aa13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 EIF2AK1Q9BQI3 630 aaKnown RBP13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 PACSIN2Q9UNF0 486 aaPredicted RBP13.47□□□□□ -0.25
TMEM39B-208ENST00000487305 GOLGA6L7A0A1B0GV03 622 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 F8VZ95 297 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 MSH4O15457 936 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 PPFIA2O75334 1257 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 BCRP11274 1271 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 ZNF76P36508 570 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 ATP1A2P50993 1020 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 GTF2A1P52655 376 aaPredicted RBP13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 ZNF131P52739 623 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 GALCP54803 685 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 ZNF844Q08AG5 666 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 PPP2R5CQ13362 524 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 RINT1Q6NUQ1 792 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 TMC3Q7Z5M5 1100 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 RPAINQ86UA6 219 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 SH2D3CQ8N5H7 860 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 NACC1Q96RE7 527 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 HSD17B14Q9BPX1 270 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 WDR11Q9BZH6 1224 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 STMN4Q9H169 189 aaPredicted RBP13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 BHMT2Q9H2M3 363 aa13.46□□□□□ -0.25
TMEM39B-208ENST00000487305 ANKRD62A6NC57 917 aa13.46□□□□□ -0.26
TMEM39B-208ENST00000487305 PODXLO00592 558 aa13.46□□□□□ -0.26
TMEM39B-208ENST00000487305 TRAPPC3O43617 180 aa13.46□□□□□ -0.26
TMEM39B-208ENST00000487305 MAPTP10636 758 aaKnown RBP13.46□□□□□ -0.26
TMEM39B-208ENST00000487305 GUCY2CP25092 1073 aa13.46□□□□□ -0.26
TMEM39B-208ENST00000487305 STAT3P40763 770 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms