RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PRSS33Q8NF86 280 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 LILRB1Q8NHL6 650 aaPredicted RBP6.17□□□□□ -1.42
SF1-217ENST00000486960 EPS8L3Q8TE67 593 aaKnown RBP6.17□□□□□ -1.42
SF1-217ENST00000486960 DDX1Q92499 740 aaKnown RBP6.17□□□□□ -1.42
SF1-217ENST00000486960 LRGUKQ96M69 825 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 CCDC138Q96M89 665 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 BAG1Q99933 345 aaPredicted RBP6.17□□□□□ -1.42
SF1-217ENST00000486960 ADPGKQ9BRR6 497 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 DHRS4Q9BTZ2 278 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 KATNAL1Q9BW62 490 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 CARD14Q9BXL6 1004 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 SLC12A5Q9H2X9 1139 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 RWDD1Q9H446 243 aaPredicted RBP6.17□□□□□ -1.42
SF1-217ENST00000486960 PANK3Q9H999 370 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 ZNHIT6Q9NWK9 470 aaKnown RBP6.17□□□□□ -1.42
SF1-217ENST00000486960 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 UBP1Q9NZI7 540 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 DKK3Q9UBP4 350 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 ZNF112Q9UJU3 913 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 GIT1Q9Y2X7 761 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 PSME4Q14997 1843 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 LOC400499M0QZD8 3231 aa6.17□□□□□ -1.42
SF1-217ENST00000486960 A0A0G2JMZ2 1700 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 PRRC2BQ5JSZ5 2229 aaKnown RBP6.16□□□□□ -1.42
SF1-217ENST00000486960 FAM221AA4D161 298 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 RRN3P2A6NIE6 340 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 C2orf81A6NN90 581 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 B4DLN1 442 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 F6X3S4 739 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 H7C1D1 291 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 SGTAO43765 313 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 TMEM127O75204 238 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 E2F6O75461 281 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 KRT1P04264 644 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 RLBP1P12271 317 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 CCNFP41002 786 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 TMPRSS15P98073 1019 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 LMNB2Q03252 620 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 CCDC85BQ15834 202 aaPredicted RBP6.16□□□□□ -1.42
SF1-217ENST00000486960 GPATCH4Q5T3I0 446 aaKnown RBP6.16□□□□□ -1.42
SF1-217ENST00000486960 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 PI16Q6UXB8 463 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 TAX1BP1Q86VP1 789 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 VSIG1Q86XK7 387 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 COLGALT2Q8IYK4 626 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 RNF168Q8IYW5 571 aaPredicted RBP6.16□□□□□ -1.42
SF1-217ENST00000486960 NRSN1Q8IZ57 195 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 TRIML1Q8N9V2 468 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 TTC16Q8NEE8 873 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 FNIP1Q8TF40 1166 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 EDEM1Q92611 657 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 ZDHHC16Q969W1 377 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 SPATA17Q96L03 361 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 SGCZQ96LD1 299 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 NCAPGQ9BPX3 1015 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 SPATA9Q9BWV2 254 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 NUCKS1Q9H1E3 243 aaKnown RBP6.16□□□□□ -1.42
SF1-217ENST00000486960 BRD9Q9H8M2 597 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 ARFGAP3Q9NP61 516 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 OSGEPQ9NPF4 335 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 ANLNQ9NQW6 1124 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 KCNQ5Q9NR82 932 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 C1orf112Q9NSG2 853 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 IRAK4Q9NWZ3 460 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 NSMCE4AQ9NXX6 385 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 CFAP45Q9UL16 551 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 ITM2BQ9Y287 266 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 TMEM98Q9Y2Y6 226 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 KNSTRNQ9Y448 316 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 ATP6V0A2Q9Y487 856 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 EVC2Q86UK5 1308 aa6.16□□□□□ -1.42
SF1-217ENST00000486960 COL1A1P02452 1464 aaPredicted RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 LRRC10BA6NIK2 292 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 PHF20L1A8MW92 1017 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 EYA2O00167 538 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 MASP2O00187 686 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 PLOD2O00469 737 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 GREM1O60565 184 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 NPTXRO95502 500 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 SLC4A1P02730 911 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 DNTTP04053 509 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 PDGFAP04085 211 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 KCNJ6P48051 423 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 LIMK1P53667 647 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 ATXN1P54253 815 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 MAP7Q14244 749 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 ADGRE1Q14246 886 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 BECN1Q14457 450 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 MYBPC3Q14896 1274 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 TNIP1Q15025 636 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 RRS1Q15050 365 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 SHHQ15465 462 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 DNTTIP2Q5QJE6 756 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 ANGEL2Q5VTE6 544 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 CNSTQ6PJW8 725 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 ENOSF1Q7L5Y1 443 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 KDELC2Q7Z4H8 507 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 RETREG3Q86VR2 466 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 FAM43AQ8N2R8 423 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms