RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TARBP2Q15633 366 aaKnown RBP14.24□□□□□ -0.13
HDAC6-229ENST00000486665 KIAA0753Q2KHM9 967 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 XKR9Q5GH70 373 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 KRBA2Q6ZNG9 492 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 OTUD6AQ7L8S5 288 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 KCTD17Q8N5Z5 321 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 SYT2Q8N9I0 419 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-229ENST00000486665 BBXQ8WY36 941 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-229ENST00000486665 PAGE5Q96GU1 130 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 FAM167AQ96KS9 214 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 BHMT2Q9H2M3 363 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 STK17AQ9UEE5 414 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 USP25Q9UHP3 1055 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 ZNF215Q9UL58 517 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-229ENST00000486665 CHD9Q3L8U1 2897 aa14.24□□□□□ -0.13
HDAC6-229ENST00000486665 MOXD2PA6NHM9 499 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 KIAA0355O15063 1070 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 HBP1O60381 514 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 INSRRP14616 1297 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 SMAD3P84022 425 aaKnown RBP14.23□□□□□ -0.13
HDAC6-229ENST00000486665 FAAP100Q0VG06 881 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 HIC1Q14526 733 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 NBPF20Q3BBV1 942 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 MTERF2Q49AM1 385 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 ARSHQ5FYA8 562 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 CEP57L1Q8IYX8 460 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 CNNM3Q8NE01 707 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 MAFAQ8NHW3 353 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-229ENST00000486665 TRAPPC12Q8WVT3 735 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 LARP4BQ92615 738 aaKnown RBP14.23□□□□□ -0.13
HDAC6-229ENST00000486665 ZBTB10Q96DT7 871 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 CEP170P1Q96L14 293 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 TIGD1Q96MW7 591 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 PYM1Q9BRP8 204 aaKnown RBP14.23□□□□□ -0.13
HDAC6-229ENST00000486665 CYP26B1Q9NR63 512 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 KBTBD4Q9NVX7 518 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 TRPC6Q9Y210 931 aa14.23□□□□□ -0.13
HDAC6-229ENST00000486665 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-229ENST00000486665 NPHP3-ACAD11A0A0J9YXS1 232 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 ARHGEF35A5YM69 484 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 MYMKA6NI61 221 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 MBD3O95983 291 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 SMIM10L2AP0DMW4 78 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 SMIM10L2BP0DMW5 78 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 PTMSP20962 102 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 CASP1P29466 404 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 AFMP43652 599 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 IGBP1P78318 339 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 ZNF484Q5JVG2 852 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 RINT1Q6NUQ1 792 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 PADI6Q6TGC4 694 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 C1orf186Q6ZWK4 172 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 VTI1AQ96AJ9 217 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 RUSC1Q9BVN2 902 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 KATNAL1Q9BW62 490 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 CUEDC2Q9H467 287 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 POLD4Q9HCU8 107 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 SETD4Q9NVD3 440 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 HDAC6Q9UBN7 1215 aa14.22□□□□□ -0.13
HDAC6-229ENST00000486665 TRAK2O60296 914 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 KINO60870 393 aaKnown RBP14.21□□□□□ -0.13
HDAC6-229ENST00000486665 CABYRO75952 493 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 CYP11B2P19099 503 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 ZNF200P98182 395 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-229ENST00000486665 PPFIA1Q13136 1202 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 GRIK4Q16099 956 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 MARCH8Q5T0T0 291 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 GPBP1Q86WP2 473 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 RNPC3Q96LT9 517 aaKnown RBP14.21□□□□□ -0.13
HDAC6-229ENST00000486665 TNMDQ9H2S6 317 aa14.21□□□□□ -0.13
HDAC6-229ENST00000486665 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-229ENST00000486665 MUC3AQ02505 3323 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 TTC28Q96AY4 2481 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 WDR81Q562E7 1941 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 RAG1P15918 1043 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 KLRC1P26715 233 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 CUL4BQ13620 913 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 ITGA7Q13683 1181 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 CAMK4Q16566 473 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 C16orf59Q7L2K0 433 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 MAEAQ7L5Y9 396 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 ANKRD33Q7Z3H0 272 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 USP38Q8NB14 1042 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 ERCC4Q92889 916 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-229ENST00000486665 GLT1D1Q96MS3 346 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 BLZF1Q9H2G9 400 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 CLSTN2Q9H4D0 955 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 DHX33Q9H6R0 707 aaKnown RBP14.2□□□□□ -0.14
HDAC6-229ENST00000486665 MAGEF1Q9HAY2 307 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 XPNPEP1Q9NQW7 623 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 TMEM39AQ9NV64 488 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 TBX21Q9UL17 535 aa14.2□□□□□ -0.14
HDAC6-229ENST00000486665 RRN3P2A6NIE6 340 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 USO1O60763 962 aaKnown RBP14.19□□□□□ -0.14
HDAC6-229ENST00000486665 MAFO75444 373 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-229ENST00000486665 C22orf31O95567 290 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms